Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.53□□□□□ -0.4
ACTBP60709 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ACTBP60709 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.53□□□□□ -0.4
ACTBP60709 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ACTBP60709 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
ACTBP60709 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
ACTBP60709 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ACTBP60709 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ACTBP60709 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
ACTBP60709 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.52□□□□□ -0.4
ACTBP60709 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ACTBP60709 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ACTBP60709 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
ACTBP60709 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ACTBP60709 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.52□□□□□ -0.4
ACTBP60709 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ACTBP60709 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
ACTBP60709 AC009474.1-201ENST00000455096 1565 ntBASIC12.52□□□□□ -0.4
ACTBP60709 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.52□□□□□ -0.4
ACTBP60709 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
ACTBP60709 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.4
ACTBP60709 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ACTBP60709 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.52□□□□□ -0.4
ACTBP60709 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ACTBP60709 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ACTBP60709 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ACTBP60709 AL138799.1-201ENST00000448213 1675 ntBASIC12.52□□□□□ -0.4
ACTBP60709 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ACTBP60709 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ACTBP60709 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ACTBP60709 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
ACTBP60709 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ACTBP60709 KHSRPP1-201ENST00000427983 1768 ntBASIC12.52□□□□□ -0.41
ACTBP60709 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ACTBP60709 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.52□□□□□ -0.41
ACTBP60709 AL391647.1-201ENST00000395664 511 ntBASIC12.52□□□□□ -0.41
ACTBP60709 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ACTBP60709 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.52□□□□□ -0.41
ACTBP60709 INGX-202ENST00000489074 768 ntBASIC12.52□□□□□ -0.41
ACTBP60709 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ACTBP60709 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.52□□□□□ -0.41
ACTBP60709 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ACTBP60709 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.52□□□□□ -0.41
ACTBP60709 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.52□□□□□ -0.41
ACTBP60709 AC092337.1-201ENST00000568699 1129 ntBASIC12.52□□□□□ -0.41
ACTBP60709 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.52□□□□□ -0.41
ACTBP60709 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.52□□□□□ -0.41
ACTBP60709 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ACTBP60709 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.52□□□□□ -0.41
ACTBP60709 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ACTBP60709 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.52□□□□□ -0.41
ACTBP60709 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ACTBP60709 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
ACTBP60709 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
ACTBP60709 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.52□□□□□ -0.41
ACTBP60709 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.52□□□□□ -0.41
ACTBP60709 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ACTBP60709 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ACTBP60709 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
ACTBP60709 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ACTBP60709 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ACTBP60709 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ACTBP60709 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ACTBP60709 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ACTBP60709 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ACTBP60709 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
ACTBP60709 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ACTBP60709 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ACTBP60709 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ACTBP60709 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ACTBP60709 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.51□□□□□ -0.41
ACTBP60709 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.51□□□□□ -0.41
ACTBP60709 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
ACTBP60709 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ACTBP60709 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ACTBP60709 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ACTBP60709 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
ACTBP60709 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ACTBP60709 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ACTBP60709 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ACTBP60709 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ACTBP60709 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ACTBP60709 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ACTBP60709 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.51□□□□□ -0.41
ACTBP60709 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ACTBP60709 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ACTBP60709 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ACTBP60709 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.51□□□□□ -0.41
ACTBP60709 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ACTBP60709 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ACTBP60709 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.51□□□□□ -0.41
ACTBP60709 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.51□□□□□ -0.41
ACTBP60709 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.51□□□□□ -0.41
ACTBP60709 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
ACTBP60709 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.51□□□□□ -0.41
ACTBP60709 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.51□□□□□ -0.41
ACTBP60709 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.51□□□□□ -0.41
ACTBP60709 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.51□□□□□ -0.41
ACTBP60709 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms