Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CLDN12P56749 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.65□□□□□ -0.38
CLDN12P56749 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CLDN12P56749 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.65□□□□□ -0.38
CLDN12P56749 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CLDN12P56749 RN7SKP230-201ENST00000365642 335 ntBASIC12.65□□□□□ -0.38
CLDN12P56749 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.65□□□□□ -0.38
CLDN12P56749 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.65□□□□□ -0.38
CLDN12P56749 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.65□□□□□ -0.38
CLDN12P56749 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.65□□□□□ -0.38
CLDN12P56749 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.65□□□□□ -0.38
CLDN12P56749 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.65□□□□□ -0.38
CLDN12P56749 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.65□□□□□ -0.38
CLDN12P56749 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.65□□□□□ -0.38
CLDN12P56749 AC114812.1-204ENST00000449669 728 ntBASIC12.65□□□□□ -0.38
CLDN12P56749 IGHV3-42-201ENST00000520410 361 ntBASIC12.65□□□□□ -0.38
CLDN12P56749 AC023310.3-201ENST00000557027 670 ntBASIC12.65□□□□□ -0.38
CLDN12P56749 AC100756.1-201ENST00000562736 682 ntBASIC12.65□□□□□ -0.38
CLDN12P56749 AC004449.1-201ENST00000564240 433 ntBASIC12.65□□□□□ -0.38
CLDN12P56749 AC138749.3-201ENST00000567691 622 ntBASIC12.65□□□□□ -0.38
CLDN12P56749 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.65□□□□□ -0.38
CLDN12P56749 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.65□□□□□ -0.38
CLDN12P56749 AL390955.2-201ENST00000603032 514 ntBASIC12.65□□□□□ -0.38
CLDN12P56749 AL158211.3-201ENST00000607385 239 ntBASIC12.65□□□□□ -0.38
CLDN12P56749 AC116165.1-201ENST00000611806 668 ntBASIC12.65□□□□□ -0.38
CLDN12P56749 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CLDN12P56749 AL022313.4-201ENST00000562756 2046 ntBASIC12.65□□□□□ -0.38
CLDN12P56749 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
CLDN12P56749 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.65□□□□□ -0.38
CLDN12P56749 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.65□□□□□ -0.38
CLDN12P56749 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 AC020910.5-201ENST00000623668 1865 ntBASIC12.65□□□□□ -0.38
CLDN12P56749 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN12P56749 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CLDN12P56749 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CLDN12P56749 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CLDN12P56749 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.65□□□□□ -0.39
CLDN12P56749 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.65□□□□□ -0.39
CLDN12P56749 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
CLDN12P56749 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.65□□□□□ -0.39
CLDN12P56749 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CLDN12P56749 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.64□□□□□ -0.39
CLDN12P56749 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
CLDN12P56749 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CLDN12P56749 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.64□□□□□ -0.39
CLDN12P56749 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.64□□□□□ -0.39
CLDN12P56749 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CLDN12P56749 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.64□□□□□ -0.39
CLDN12P56749 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CLDN12P56749 AC125807.2-201ENST00000513358 3514 ntBASIC12.64□□□□□ -0.39
CLDN12P56749 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.64□□□□□ -0.39
CLDN12P56749 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CLDN12P56749 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CLDN12P56749 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.64□□□□□ -0.39
CLDN12P56749 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CLDN12P56749 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CLDN12P56749 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN12P56749 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.64□□□□□ -0.39
CLDN12P56749 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC12.64□□□□□ -0.39
CLDN12P56749 AC241585.1-201ENST00000433527 519 ntBASIC12.64□□□□□ -0.39
CLDN12P56749 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.64□□□□□ -0.39
CLDN12P56749 AP006288.1-201ENST00000446065 395 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms