Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.31■□□□□ 0.2
EPHB4P54760 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.31■□□□□ 0.2
EPHB4P54760 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
EPHB4P54760 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.31■□□□□ 0.2
EPHB4P54760 NDUFS6P1-201ENST00000485187 316 ntBASIC16.31■□□□□ 0.2
EPHB4P54760 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.31■□□□□ 0.2
EPHB4P54760 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.31■□□□□ 0.2
EPHB4P54760 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.31■□□□□ 0.2
EPHB4P54760 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.31■□□□□ 0.2
EPHB4P54760 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.31■□□□□ 0.2
EPHB4P54760 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.31■□□□□ 0.2
EPHB4P54760 AC138696.2-201ENST00000607376 223 ntBASIC16.31■□□□□ 0.2
EPHB4P54760 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.31■□□□□ 0.2
EPHB4P54760 Z98259.2-201ENST00000641583 609 ntBASIC16.31■□□□□ 0.2
EPHB4P54760 AL645728.2-202ENST00000641679 227 ntBASIC16.31■□□□□ 0.2
EPHB4P54760 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 AL157414.3-201ENST00000624276 1954 ntBASIC16.31■□□□□ 0.2
EPHB4P54760 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
EPHB4P54760 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.31■□□□□ 0.2
EPHB4P54760 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EPHB4P54760 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.31■□□□□ 0.2
EPHB4P54760 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.31■□□□□ 0.2
EPHB4P54760 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.31■□□□□ 0.2
EPHB4P54760 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
EPHB4P54760 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.3■□□□□ 0.2
EPHB4P54760 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 AC010327.5-201ENST00000586923 3061 ntBASIC16.3■□□□□ 0.2
EPHB4P54760 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
EPHB4P54760 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
EPHB4P54760 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
EPHB4P54760 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
EPHB4P54760 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
EPHB4P54760 IDS-203ENST00000428056 1213 ntTSL 2 BASIC16.3■□□□□ 0.2
EPHB4P54760 AC078875.1-201ENST00000431907 724 ntBASIC16.3■□□□□ 0.2
EPHB4P54760 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.3■□□□□ 0.2
EPHB4P54760 AC012441.2-201ENST00000444843 739 ntBASIC16.3■□□□□ 0.2
EPHB4P54760 AC018463.1-201ENST00000456674 917 ntBASIC16.3■□□□□ 0.2
EPHB4P54760 RPL18AP3-201ENST00000462885 528 ntBASIC16.3■□□□□ 0.2
EPHB4P54760 AC130709.1-201ENST00000484779 1212 ntBASIC16.3■□□□□ 0.2
EPHB4P54760 AC008723.1-201ENST00000506922 207 ntBASIC16.3■□□□□ 0.2
EPHB4P54760 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.3■□□□□ 0.2
EPHB4P54760 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 AL157813.1-201ENST00000612996 587 ntBASIC16.3■□□□□ 0.2
EPHB4P54760 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC16.3■□□□□ 0.2
EPHB4P54760 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.3■□□□□ 0.2
EPHB4P54760 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
EPHB4P54760 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EPHB4P54760 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.29■□□□□ 0.2
EPHB4P54760 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.29■□□□□ 0.2
EPHB4P54760 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.29■□□□□ 0.2
EPHB4P54760 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 AL928921.2-201ENST00000641325 2442 ntBASIC16.29■□□□□ 0.2
EPHB4P54760 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
EPHB4P54760 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.29■□□□□ 0.2
EPHB4P54760 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.29■□□□□ 0.2
EPHB4P54760 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
EPHB4P54760 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
EPHB4P54760 AC026410.1-201ENST00000507366 1101 ntBASIC16.29■□□□□ 0.2
EPHB4P54760 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.29■□□□□ 0.2
EPHB4P54760 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms