Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 OR2I1P-210ENST00000642037 4691 ntBASIC15.1■□□□□ 0.01
MTHFRP42898 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFRP42898 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFRP42898 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
MTHFRP42898 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFRP42898 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFRP42898 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.1■□□□□ 0.01
MTHFRP42898 AC026748.1-201ENST00000624349 3251 ntBASIC15.1■□□□□ 0.01
MTHFRP42898 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.1■□□□□ 0.01
MTHFRP42898 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.1■□□□□ 0.01
MTHFRP42898 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.1■□□□□ 0.01
MTHFRP42898 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
MTHFRP42898 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFRP42898 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFRP42898 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC15.1■□□□□ 0.01
MTHFRP42898 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFRP42898 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFRP42898 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
MTHFRP42898 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFRP42898 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFRP42898 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFRP42898 AC018638.5-201ENST00000450885 754 ntBASIC15.1■□□□□ 0.01
MTHFRP42898 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC15.1■□□□□ 0.01
MTHFRP42898 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFRP42898 DNM1P51-201ENST00000558149 522 ntBASIC15.1■□□□□ 0.01
MTHFRP42898 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC15.1■□□□□ 0.01
MTHFRP42898 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.1■□□□□ 0.01
MTHFRP42898 SIGLEC22P-201ENST00000599104 714 ntBASIC15.1■□□□□ 0.01
MTHFRP42898 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.1■□□□□ 0.01
MTHFRP42898 AC007250.1-201ENST00000608934 338 ntBASIC15.1■□□□□ 0.01
MTHFRP42898 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFRP42898 AC091951.1-201ENST00000512854 2465 ntBASIC15.1■□□□□ 0.01
MTHFRP42898 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.1■□□□□ 0.01
MTHFRP42898 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFRP42898 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFRP42898 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.1■□□□□ 0.01
MTHFRP42898 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.1■□□□□ 0.01
MTHFRP42898 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.1■□□□□ 0.01
MTHFRP42898 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFRP42898 FAM90A21P-201ENST00000510875 1396 ntBASIC15.1■□□□□ 0.01
MTHFRP42898 FAM90A15P-201ENST00000514465 1395 ntBASIC15.1■□□□□ 0.01
MTHFRP42898 FAM90A6P-201ENST00000515148 1394 ntBASIC15.1■□□□□ 0.01
MTHFRP42898 FAM90A16P-201ENST00000526662 1395 ntBASIC15.1■□□□□ 0.01
MTHFRP42898 FAM90A9P-201ENST00000527940 1395 ntBASIC15.1■□□□□ 0.01
MTHFRP42898 FAM90A5P-201ENST00000528738 1395 ntBASIC15.1■□□□□ 0.01
MTHFRP42898 FAM90A14P-201ENST00000530386 1395 ntBASIC15.1■□□□□ 0.01
MTHFRP42898 FAM90A13P-201ENST00000534703 1395 ntBASIC15.1■□□□□ 0.01
MTHFRP42898 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFRP42898 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MTHFRP42898 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFRP42898 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFRP42898 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.09■□□□□ 0.01
MTHFRP42898 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
MTHFRP42898 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
MTHFRP42898 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
MTHFRP42898 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFRP42898 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFRP42898 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFRP42898 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
MTHFRP42898 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFRP42898 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
MTHFRP42898 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFRP42898 STK16-203ENST00000409516 895 ntTSL 2 BASIC15.09■□□□□ 0.01
MTHFRP42898 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.09■□□□□ 0.01
MTHFRP42898 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC15.09■□□□□ 0.01
MTHFRP42898 AC026410.1-201ENST00000507366 1101 ntBASIC15.09■□□□□ 0.01
MTHFRP42898 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.09■□□□□ 0.01
MTHFRP42898 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.09■□□□□ 0.01
MTHFRP42898 RN7SL665P-201ENST00000578793 300 ntBASIC15.09■□□□□ 0.01
MTHFRP42898 RN7SL357P-201ENST00000581065 298 ntBASIC15.09■□□□□ 0.01
MTHFRP42898 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.09■□□□□ 0.01
MTHFRP42898 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.09■□□□□ 0.01
MTHFRP42898 AC011471.3-201ENST00000623576 402 ntBASIC15.09■□□□□ 0.01
MTHFRP42898 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFRP42898 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.09■□□□□ 0.01
MTHFRP42898 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.09■□□□□ 0.01
MTHFRP42898 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.09■□□□□ 0.01
MTHFRP42898 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.09■□□□□ 0.01
MTHFRP42898 LINC01101-201ENST00000622953 1884 ntBASIC15.09■□□□□ 0.01
MTHFRP42898 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.09■□□□□ 0.01
MTHFRP42898 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFRP42898 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
MTHFRP42898 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFRP42898 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.09■□□□□ 0.01
MTHFRP42898 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.09■□□□□ 0.01
MTHFRP42898 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFRP42898 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.09■□□□□ 0.01
MTHFRP42898 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFRP42898 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFRP42898 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFRP42898 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTHFRP42898 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.08■□□□□ 0.01
MTHFRP42898 CICP23-201ENST00000605013 2741 ntBASIC15.08■□□□□ 0.01
MTHFRP42898 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
MTHFRP42898 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
MTHFRP42898 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MTHFRP42898 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
MTHFRP42898 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.08■□□□□ 0.01
MTHFRP42898 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.08■□□□□ 0.01
MTHFRP42898 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms