Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC11.17□□□□□ -0.62
RAB4AP20338 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
RAB4AP20338 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC11.17□□□□□ -0.62
RAB4AP20338 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.17□□□□□ -0.62
RAB4AP20338 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
RAB4AP20338 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 LPP-AS2-201ENST00000605573 2852 ntBASIC11.17□□□□□ -0.62
RAB4AP20338 CH25H-201ENST00000371852 1686 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
RAB4AP20338 PCDHA9-201ENST00000378122 6900 ntBASIC11.17□□□□□ -0.62
RAB4AP20338 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC11.17□□□□□ -0.62
RAB4AP20338 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RAB4AP20338 AC008758.4-201ENST00000435033 2593 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
RAB4AP20338 FN1-206ENST00000359671 8524 ntTSL 5 BASIC11.16□□□□□ -0.62
RAB4AP20338 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
RAB4AP20338 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 ESPL1-201ENST00000257934 6623 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
RAB4AP20338 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB4AP20338 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB4AP20338 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB4AP20338 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC11.16□□□□□ -0.62
RAB4AP20338 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
RAB4AP20338 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC11.16□□□□□ -0.62
RAB4AP20338 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
RAB4AP20338 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.16□□□□□ -0.62
RAB4AP20338 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
RAB4AP20338 RAB43-205ENST00000393308 4193 ntAPPRIS P1 TSL 4 BASIC11.16□□□□□ -0.62
RAB4AP20338 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 ZNF142-201ENST00000411696 5926 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
RAB4AP20338 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
RAB4AP20338 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB4AP20338 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC11.16□□□□□ -0.62
RAB4AP20338 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.16□□□□□ -0.62
RAB4AP20338 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC11.16□□□□□ -0.62
RAB4AP20338 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.16□□□□□ -0.62
RAB4AP20338 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC11.16□□□□□ -0.62
RAB4AP20338 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.16□□□□□ -0.62
RAB4AP20338 NME4-207ENST00000450036 985 ntTSL 3 BASIC11.16□□□□□ -0.62
RAB4AP20338 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC11.16□□□□□ -0.62
RAB4AP20338 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC11.16□□□□□ -0.62
RAB4AP20338 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB4AP20338 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
RAB4AP20338 PENK-208ENST00000523051 772 ntTSL 5 BASIC11.16□□□□□ -0.62
RAB4AP20338 TOLLIP-AS1-201ENST00000530897 939 ntBASIC11.16□□□□□ -0.62
RAB4AP20338 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.16□□□□□ -0.62
RAB4AP20338 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.16□□□□□ -0.62
RAB4AP20338 SPIB-207ENST00000597855 564 ntTSL 4 BASIC11.16□□□□□ -0.62
RAB4AP20338 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 YLPM1-201ENST00000325680 7108 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
RAB4AP20338 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB4AP20338 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB4AP20338 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB4AP20338 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
RAB4AP20338 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB4AP20338 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC11.16□□□□□ -0.62
RAB4AP20338 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC11.16□□□□□ -0.62
RAB4AP20338 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC11.16□□□□□ -0.62
RAB4AP20338 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB4AP20338 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 SLC44A4-210ENST00000544672 2634 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB4AP20338 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
RAB4AP20338 TUBGCP4-208ENST00000564079 6798 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 RIMKLA-202ENST00000431473 8909 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 PSEN1-202ENST00000357710 2776 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC11.16□□□□□ -0.62
RAB4AP20338 BCKDK-204ENST00000394951 2164 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
RAB4AP20338 MVK-214ENST00000629016 1591 ntTSL 5 BASIC11.16□□□□□ -0.62
RAB4AP20338 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
RAB4AP20338 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.16□□□□□ -0.62
RAB4AP20338 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
RAB4AP20338 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
RAB4AP20338 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms