Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.62□□□□□ -0.39
CSF1P09603 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
CSF1P09603 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.62□□□□□ -0.39
CSF1P09603 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
CSF1P09603 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.62□□□□□ -0.39
CSF1P09603 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.62□□□□□ -0.39
CSF1P09603 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.62□□□□□ -0.39
CSF1P09603 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 AL645937.2-201ENST00000396808 931 ntBASIC12.62□□□□□ -0.39
CSF1P09603 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.62□□□□□ -0.39
CSF1P09603 AL080243.2-201ENST00000418783 582 ntBASIC12.62□□□□□ -0.39
CSF1P09603 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.62□□□□□ -0.39
CSF1P09603 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.62□□□□□ -0.39
CSF1P09603 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.62□□□□□ -0.39
CSF1P09603 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.62□□□□□ -0.39
CSF1P09603 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.62□□□□□ -0.39
CSF1P09603 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.62□□□□□ -0.39
CSF1P09603 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CSF1P09603 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.62□□□□□ -0.39
CSF1P09603 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.62□□□□□ -0.39
CSF1P09603 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.62□□□□□ -0.39
CSF1P09603 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 AC008494.3-201ENST00000606615 944 ntBASIC12.62□□□□□ -0.39
CSF1P09603 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.62□□□□□ -0.39
CSF1P09603 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CSF1P09603 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.62□□□□□ -0.39
CSF1P09603 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSF1P09603 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CSF1P09603 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.62□□□□□ -0.39
CSF1P09603 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.61□□□□□ -0.39
CSF1P09603 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.61□□□□□ -0.39
CSF1P09603 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.61□□□□□ -0.39
CSF1P09603 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 MIR193BHG-211ENST00000641433 5365 ntBASIC12.61□□□□□ -0.39
CSF1P09603 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.61□□□□□ -0.39
CSF1P09603 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.61□□□□□ -0.39
CSF1P09603 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CSF1P09603 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CSF1P09603 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.61□□□□□ -0.39
CSF1P09603 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CSF1P09603 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.61□□□□□ -0.39
CSF1P09603 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.61□□□□□ -0.39
CSF1P09603 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
CSF1P09603 ZNF890P-202ENST00000530367 1156 ntBASIC12.61□□□□□ -0.39
CSF1P09603 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.61□□□□□ -0.39
CSF1P09603 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.61□□□□□ -0.39
CSF1P09603 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 MIR6805-201ENST00000615055 62 ntBASIC12.61□□□□□ -0.39
CSF1P09603 AC007431.3-201ENST00000623221 587 ntBASIC12.61□□□□□ -0.39
CSF1P09603 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.61□□□□□ -0.39
CSF1P09603 AL157996.1-201ENST00000624684 2299 ntBASIC12.61□□□□□ -0.39
CSF1P09603 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
CSF1P09603 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.61□□□□□ -0.39
CSF1P09603 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.61□□□□□ -0.39
CSF1P09603 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
CSF1P09603 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSF1P09603 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CSF1P09603 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms