Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF40O75150 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.78■□□□□ 0.12
RNF40O75150 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.78■□□□□ 0.12
RNF40O75150 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.78■□□□□ 0.12
RNF40O75150 AL022328.3-201ENST00000607943 679 ntBASIC15.78■□□□□ 0.12
RNF40O75150 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF40O75150 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF40O75150 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC15.78■□□□□ 0.12
RNF40O75150 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF40O75150 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RNF40O75150 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF40O75150 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
RNF40O75150 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.78■□□□□ 0.12
RNF40O75150 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF40O75150 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF40O75150 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF40O75150 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF40O75150 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF40O75150 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF40O75150 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF40O75150 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RNF40O75150 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF40O75150 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF40O75150 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF40O75150 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF40O75150 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF40O75150 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF40O75150 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF40O75150 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF40O75150 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF40O75150 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.77■□□□□ 0.12
RNF40O75150 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF40O75150 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF40O75150 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RNF40O75150 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF40O75150 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF40O75150 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF40O75150 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF40O75150 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF40O75150 AC104306.2-201ENST00000451877 341 ntBASIC15.77■□□□□ 0.12
RNF40O75150 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF40O75150 TMEM198B-204ENST00000484016 896 ntBASIC15.77■□□□□ 0.12
RNF40O75150 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.77■□□□□ 0.12
RNF40O75150 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF40O75150 AP001258.2-201ENST00000529891 490 ntBASIC15.77■□□□□ 0.12
RNF40O75150 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RNF40O75150 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF40O75150 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF40O75150 MIR4741-201ENST00000579822 90 ntBASIC15.77■□□□□ 0.12
RNF40O75150 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.77■□□□□ 0.12
RNF40O75150 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.77■□□□□ 0.12
RNF40O75150 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.77■□□□□ 0.12
RNF40O75150 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RNF40O75150 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
RNF40O75150 KRT8P24-201ENST00000560290 1559 ntBASIC15.77■□□□□ 0.11
RNF40O75150 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RNF40O75150 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.77■□□□□ 0.11
RNF40O75150 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.77■□□□□ 0.11
RNF40O75150 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.77■□□□□ 0.11
RNF40O75150 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.77■□□□□ 0.11
RNF40O75150 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC15.77■□□□□ 0.11
RNF40O75150 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.77■□□□□ 0.11
RNF40O75150 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF40O75150 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
RNF40O75150 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF40O75150 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF40O75150 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RNF40O75150 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
RNF40O75150 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF40O75150 AL138799.1-201ENST00000448213 1675 ntBASIC15.76■□□□□ 0.11
RNF40O75150 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF40O75150 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF40O75150 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF40O75150 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF40O75150 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF40O75150 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RNF40O75150 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF40O75150 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RNF40O75150 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF40O75150 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF40O75150 AHCYP2-201ENST00000430630 1300 ntBASIC15.76■□□□□ 0.11
RNF40O75150 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF40O75150 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF40O75150 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF40O75150 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF40O75150 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RNF40O75150 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF40O75150 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF40O75150 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF40O75150 AL590640.2-201ENST00000457038 527 ntBASIC15.76■□□□□ 0.11
RNF40O75150 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF40O75150 GAPDHP40-201ENST00000505218 1006 ntBASIC15.76■□□□□ 0.11
RNF40O75150 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.76■□□□□ 0.11
RNF40O75150 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RNF40O75150 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.76■□□□□ 0.11
RNF40O75150 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RNF40O75150 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF40O75150 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF40O75150 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
RNF40O75150 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms