Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC026803.1-201ENST00000569130 274 ntBASIC12.97□□□□□ -0.33
ZIC3O60481 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.97□□□□□ -0.33
ZIC3O60481 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.97□□□□□ -0.33
ZIC3O60481 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.97□□□□□ -0.33
ZIC3O60481 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
ZIC3O60481 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
ZIC3O60481 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 AC007952.5-201ENST00000572818 1486 ntBASIC12.97□□□□□ -0.33
ZIC3O60481 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
ZIC3O60481 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.97□□□□□ -0.33
ZIC3O60481 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
ZIC3O60481 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.96□□□□□ -0.33
ZIC3O60481 LINC01815-202ENST00000641468 1409 ntBASIC12.96□□□□□ -0.33
ZIC3O60481 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC3O60481 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC3O60481 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC3O60481 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC3O60481 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.96□□□□□ -0.33
ZIC3O60481 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.96□□□□□ -0.33
ZIC3O60481 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.96□□□□□ -0.33
ZIC3O60481 CICP16-201ENST00000502609 2813 ntBASIC12.96□□□□□ -0.33
ZIC3O60481 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.96□□□□□ -0.33
ZIC3O60481 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
ZIC3O60481 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC3O60481 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.96□□□□□ -0.33
ZIC3O60481 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC3O60481 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC3O60481 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC3O60481 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC3O60481 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.96□□□□□ -0.33
ZIC3O60481 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC3O60481 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.96□□□□□ -0.33
ZIC3O60481 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC3O60481 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.96□□□□□ -0.33
ZIC3O60481 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC3O60481 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.96□□□□□ -0.33
ZIC3O60481 RPS9P1-201ENST00000419943 583 ntBASIC12.96□□□□□ -0.33
ZIC3O60481 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.96□□□□□ -0.33
ZIC3O60481 AC026320.2-201ENST00000434379 478 ntBASIC12.96□□□□□ -0.33
ZIC3O60481 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
ZIC3O60481 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.96□□□□□ -0.33
ZIC3O60481 RN7SL258P-201ENST00000478664 300 ntBASIC12.96□□□□□ -0.33
ZIC3O60481 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.96□□□□□ -0.33
ZIC3O60481 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC12.96□□□□□ -0.33
ZIC3O60481 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.96□□□□□ -0.33
ZIC3O60481 AL512310.5-201ENST00000551999 515 ntBASIC12.96□□□□□ -0.33
ZIC3O60481 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC3O60481 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC3O60481 AC242376.1-201ENST00000559033 726 ntBASIC12.96□□□□□ -0.33
ZIC3O60481 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ZIC3O60481 PHBP15-201ENST00000574228 665 ntBASIC12.96□□□□□ -0.33
ZIC3O60481 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.96□□□□□ -0.33
ZIC3O60481 MIR4754-201ENST00000582477 89 ntBASIC12.96□□□□□ -0.33
ZIC3O60481 LINC01783-202ENST00000614408 828 ntBASIC12.96□□□□□ -0.33
ZIC3O60481 BX284668.2-205ENST00000619677 828 ntBASIC12.96□□□□□ -0.33
ZIC3O60481 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC3O60481 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.96□□□□□ -0.33
ZIC3O60481 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.96□□□□□ -0.33
ZIC3O60481 BRD7P5-201ENST00000299197 1822 ntBASIC12.96□□□□□ -0.33
ZIC3O60481 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC3O60481 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC3O60481 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ZIC3O60481 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZIC3O60481 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.96□□□□□ -0.34
ZIC3O60481 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.96□□□□□ -0.34
ZIC3O60481 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZIC3O60481 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.96□□□□□ -0.34
ZIC3O60481 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
ZIC3O60481 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
ZIC3O60481 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
ZIC3O60481 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
ZIC3O60481 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ZIC3O60481 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
ZIC3O60481 AC027601.5-201ENST00000624065 2482 ntBASIC12.96□□□□□ -0.34
ZIC3O60481 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.96□□□□□ -0.34
ZIC3O60481 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.96□□□□□ -0.34
ZIC3O60481 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ZIC3O60481 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.96□□□□□ -0.34
ZIC3O60481 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.96□□□□□ -0.34
ZIC3O60481 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.96□□□□□ -0.34
ZIC3O60481 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZIC3O60481 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZIC3O60481 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ZIC3O60481 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZIC3O60481 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZIC3O60481 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ZIC3O60481 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZIC3O60481 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.95□□□□□ -0.34
ZIC3O60481 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.95□□□□□ -0.34
ZIC3O60481 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ZIC3O60481 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ZIC3O60481 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms