Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 MIR4435-2HG-201ENST00000308604 552 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 OR7E155P-201ENST00000412208 1014 ntBASIC13.06□□□□□ -0.32
CHD8Q9HCK8 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 AC010442.2-201ENST00000509301 407 ntBASIC13.06□□□□□ -0.32
CHD8Q9HCK8 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC13.06□□□□□ -0.32
CHD8Q9HCK8 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 AC005332.2-201ENST00000590010 930 ntBASIC13.06□□□□□ -0.32
CHD8Q9HCK8 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 AC064801.2-201ENST00000625052 1303 ntBASIC13.06□□□□□ -0.32
CHD8Q9HCK8 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 LAP3P2-201ENST00000454686 1454 ntBASIC13.06□□□□□ -0.32
CHD8Q9HCK8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 POLR3DP1-201ENST00000398689 1176 ntBASIC13.06□□□□□ -0.32
CHD8Q9HCK8 AC092865.2-201ENST00000439409 971 ntBASIC13.06□□□□□ -0.32
CHD8Q9HCK8 RN7SL47P-201ENST00000488710 299 ntBASIC13.06□□□□□ -0.32
CHD8Q9HCK8 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 AL078624.1-201ENST00000604004 547 ntBASIC13.06□□□□□ -0.32
CHD8Q9HCK8 AC009812.1-201ENST00000605948 1059 ntBASIC13.06□□□□□ -0.32
CHD8Q9HCK8 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHD8Q9HCK8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 AC112250.1-201ENST00000504640 745 ntBASIC13.05□□□□□ -0.32
CHD8Q9HCK8 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 ACTG1P23-201ENST00000437653 1074 ntBASIC13.05□□□□□ -0.32
CHD8Q9HCK8 HNRNPA1P3-201ENST00000440968 551 ntBASIC13.05□□□□□ -0.32
CHD8Q9HCK8 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 RN7SL76P-201ENST00000482435 289 ntBASIC13.05□□□□□ -0.32
CHD8Q9HCK8 RN7SL477P-201ENST00000488440 286 ntBASIC13.05□□□□□ -0.32
CHD8Q9HCK8 IGHV7-56-201ENST00000518372 351 ntBASIC13.05□□□□□ -0.32
CHD8Q9HCK8 KRTAP2-2-202ENST00000542910 390 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHD8Q9HCK8 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms