Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
AMBRA1Q9C0C7 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 AC020910.5-201ENST00000623668 1865 ntBASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 AL162726.2-201ENST00000438986 1017 ntBASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 AC133539.2-201ENST00000604757 467 ntBASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
AMBRA1Q9C0C7 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 AL118506.1-201ENST00000601296 3082 ntBASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 AP002761.4-201ENST00000565433 3361 ntBASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 ACKR1-201ENST00000368121 1240 ntBASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 ENPP7P5-201ENST00000541031 1031 ntBASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 SORD2P-201ENST00000558556 1069 ntBASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 CLUHP6-201ENST00000580789 941 ntBASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 AC138696.2-201ENST00000607376 223 ntBASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 AL033527.5-201ENST00000641382 801 ntBASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
AMBRA1Q9C0C7 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms