Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 OR10B1P-201ENST00000601666 907 ntBASIC13.78□□□□□ -0.2
COL21A1Q96P44 AC138696.2-201ENST00000607376 223 ntBASIC13.78□□□□□ -0.2
COL21A1Q96P44 AC133552.6-201ENST00000613406 534 ntBASIC13.78□□□□□ -0.2
COL21A1Q96P44 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.78□□□□□ -0.2
COL21A1Q96P44 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL21A1Q96P44 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
COL21A1Q96P44 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL21A1Q96P44 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL21A1Q96P44 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL21A1Q96P44 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL21A1Q96P44 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL21A1Q96P44 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
COL21A1Q96P44 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
COL21A1Q96P44 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
COL21A1Q96P44 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
COL21A1Q96P44 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL21A1Q96P44 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL21A1Q96P44 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL21A1Q96P44 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL21A1Q96P44 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL21A1Q96P44 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL21A1Q96P44 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL21A1Q96P44 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL21A1Q96P44 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL21A1Q96P44 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL21A1Q96P44 AC026954.1-201ENST00000429771 1293 ntBASIC13.77□□□□□ -0.21
COL21A1Q96P44 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL21A1Q96P44 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL21A1Q96P44 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL21A1Q96P44 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL21A1Q96P44 TMEM198B-204ENST00000484016 896 ntBASIC13.77□□□□□ -0.21
COL21A1Q96P44 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 AL391280.1-201ENST00000506969 1062 ntBASIC13.77□□□□□ -0.21
COL21A1Q96P44 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL21A1Q96P44 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 KRT8P24-201ENST00000560290 1559 ntBASIC13.77□□□□□ -0.21
COL21A1Q96P44 AC011840.2-201ENST00000563063 1520 ntBASIC13.77□□□□□ -0.21
COL21A1Q96P44 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 COX11-210ENST00000639671 696 ntBASIC13.77□□□□□ -0.21
COL21A1Q96P44 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL21A1Q96P44 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL21A1Q96P44 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL21A1Q96P44 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
COL21A1Q96P44 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
COL21A1Q96P44 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
COL21A1Q96P44 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
COL21A1Q96P44 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.76□□□□□ -0.21
COL21A1Q96P44 AC215219.1-201ENST00000400706 1817 ntBASIC13.76□□□□□ -0.21
COL21A1Q96P44 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms