Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 KRT18P36-201ENST00000411618 1276 ntBASIC15.34■□□□□ 0.05
UBA3Q8TBC4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 AC106794.1-201ENST00000506935 792 ntBASIC15.34■□□□□ 0.05
UBA3Q8TBC4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 AC018629.1-201ENST00000623381 1736 ntBASIC15.34■□□□□ 0.05
UBA3Q8TBC4 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBA3Q8TBC4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBA3Q8TBC4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBA3Q8TBC4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBA3Q8TBC4 AC016397.2-201ENST00000624848 1985 ntBASIC15.33■□□□□ 0.05
UBA3Q8TBC4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 AL022313.4-201ENST00000562756 2046 ntBASIC15.33■□□□□ 0.04
UBA3Q8TBC4 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 AP001258.2-201ENST00000529891 490 ntBASIC15.33■□□□□ 0.04
UBA3Q8TBC4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 AC104506.1-201ENST00000609247 429 ntBASIC15.33■□□□□ 0.04
UBA3Q8TBC4 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBA3Q8TBC4 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 PGAM1P5-201ENST00000548011 764 ntBASIC15.32■□□□□ 0.04
UBA3Q8TBC4 AC013355.1-201ENST00000562625 723 ntBASIC15.32■□□□□ 0.04
UBA3Q8TBC4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.32■□□□□ 0.04
UBA3Q8TBC4 AP000346.4-201ENST00000614827 381 ntBASIC15.32■□□□□ 0.04
UBA3Q8TBC4 AL136295.7-201ENST00000619226 1200 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms