Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13CQ709C8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13CQ709C8 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13CQ709C8 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13CQ709C8 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13CQ709C8 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13CQ709C8 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13CQ709C8 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13CQ709C8 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13CQ709C8 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13CQ709C8 AC000077.1-201ENST00000420012 953 ntBASIC11.65□□□□□ -0.54
VPS13CQ709C8 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC11.65□□□□□ -0.54
VPS13CQ709C8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13CQ709C8 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
VPS13CQ709C8 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
VPS13CQ709C8 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.65□□□□□ -0.55
VPS13CQ709C8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
VPS13CQ709C8 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC11.65□□□□□ -0.55
VPS13CQ709C8 OR7E12P-201ENST00000344740 973 ntBASIC11.65□□□□□ -0.55
VPS13CQ709C8 RHOC-205ENST00000369636 786 ntTSL 2 BASIC11.65□□□□□ -0.55
VPS13CQ709C8 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
VPS13CQ709C8 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
VPS13CQ709C8 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC11.65□□□□□ -0.55
VPS13CQ709C8 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
VPS13CQ709C8 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC11.65□□□□□ -0.55
VPS13CQ709C8 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC11.65□□□□□ -0.55
VPS13CQ709C8 RN7SL605P-201ENST00000577229 281 ntBASIC11.65□□□□□ -0.55
VPS13CQ709C8 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC11.65□□□□□ -0.55
VPS13CQ709C8 IFNL3P1-201ENST00000595082 501 ntBASIC11.65□□□□□ -0.55
VPS13CQ709C8 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC11.65□□□□□ -0.55
VPS13CQ709C8 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
VPS13CQ709C8 AL157996.1-201ENST00000624684 2299 ntBASIC11.65□□□□□ -0.55
VPS13CQ709C8 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 DUT-208ENST00000559540 1441 ntTSL 2 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 AL928654.5-201ENST00000624831 2501 ntBASIC11.64□□□□□ -0.55
VPS13CQ709C8 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 SSR4-202ENST00000370085 526 ntTSL 2 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 RPL18AP16-201ENST00000424057 531 ntBASIC11.64□□□□□ -0.55
VPS13CQ709C8 AC092903.1-201ENST00000466506 262 ntBASIC11.64□□□□□ -0.55
VPS13CQ709C8 AC147876.1-201ENST00000504408 322 ntBASIC11.64□□□□□ -0.55
VPS13CQ709C8 AC005777.1-201ENST00000588332 187 ntBASIC11.64□□□□□ -0.55
VPS13CQ709C8 AC021321.1-201ENST00000607397 1113 ntBASIC11.64□□□□□ -0.55
VPS13CQ709C8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
VPS13CQ709C8 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
VPS13CQ709C8 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms