Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
H3F3AP84243 AC016397.2-201ENST00000624848 1985 ntBASIC12.96□□□□□ -0.33
H3F3AP84243 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
H3F3AP84243 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3AP84243 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3AP84243 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3AP84243 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3AP84243 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3AP84243 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.96□□□□□ -0.33
H3F3AP84243 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3AP84243 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
H3F3AP84243 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3AP84243 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
H3F3AP84243 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3AP84243 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.96□□□□□ -0.33
H3F3AP84243 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3AP84243 FAM86MP-201ENST00000340703 885 ntBASIC12.96□□□□□ -0.33
H3F3AP84243 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.96□□□□□ -0.33
H3F3AP84243 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
H3F3AP84243 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.96□□□□□ -0.33
H3F3AP84243 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3AP84243 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.96□□□□□ -0.33
H3F3AP84243 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.96□□□□□ -0.33
H3F3AP84243 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.96□□□□□ -0.33
H3F3AP84243 AC104073.2-201ENST00000453737 312 ntBASIC12.96□□□□□ -0.33
H3F3AP84243 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.96□□□□□ -0.33
H3F3AP84243 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.96□□□□□ -0.33
H3F3AP84243 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.96□□□□□ -0.33
H3F3AP84243 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.96□□□□□ -0.33
H3F3AP84243 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.96□□□□□ -0.33
H3F3AP84243 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.96□□□□□ -0.33
H3F3AP84243 AC124068.2-201ENST00000569473 1109 ntBASIC12.96□□□□□ -0.33
H3F3AP84243 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.96□□□□□ -0.33
H3F3AP84243 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.96□□□□□ -0.33
H3F3AP84243 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.96□□□□□ -0.33
H3F3AP84243 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.96□□□□□ -0.33
H3F3AP84243 AC008805.1-201ENST00000590892 364 ntBASIC12.96□□□□□ -0.33
H3F3AP84243 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.96□□□□□ -0.33
H3F3AP84243 AL132994.2-201ENST00000603120 687 ntBASIC12.96□□□□□ -0.33
H3F3AP84243 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.96□□□□□ -0.33
H3F3AP84243 AL136295.7-201ENST00000619226 1200 ntBASIC12.96□□□□□ -0.33
H3F3AP84243 AC090386.2-201ENST00000623010 1039 ntBASIC12.96□□□□□ -0.33
H3F3AP84243 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.96□□□□□ -0.33
H3F3AP84243 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.33
H3F3AP84243 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
H3F3AP84243 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.96□□□□□ -0.34
H3F3AP84243 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.34
H3F3AP84243 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H3F3AP84243 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H3F3AP84243 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
H3F3AP84243 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
H3F3AP84243 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H3F3AP84243 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
H3F3AP84243 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
H3F3AP84243 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
H3F3AP84243 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
H3F3AP84243 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.95□□□□□ -0.34
H3F3AP84243 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.95□□□□□ -0.34
H3F3AP84243 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.95□□□□□ -0.34
H3F3AP84243 AC007274.1-201ENST00000439805 662 ntBASIC12.95□□□□□ -0.34
H3F3AP84243 AC006033.1-201ENST00000440505 426 ntBASIC12.95□□□□□ -0.34
H3F3AP84243 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.95□□□□□ -0.34
H3F3AP84243 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 AC092658.1-201ENST00000505836 891 ntBASIC12.95□□□□□ -0.34
H3F3AP84243 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.95□□□□□ -0.34
H3F3AP84243 PGAM1P5-201ENST00000548011 764 ntBASIC12.95□□□□□ -0.34
H3F3AP84243 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.95□□□□□ -0.34
H3F3AP84243 RN7SL219P-201ENST00000582872 296 ntBASIC12.95□□□□□ -0.34
H3F3AP84243 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.95□□□□□ -0.34
H3F3AP84243 AL118558.3-201ENST00000607414 1079 ntBASIC12.95□□□□□ -0.34
H3F3AP84243 AL022328.3-201ENST00000607943 679 ntBASIC12.95□□□□□ -0.34
H3F3AP84243 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.95□□□□□ -0.34
H3F3AP84243 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.95□□□□□ -0.34
H3F3AP84243 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.95□□□□□ -0.34
H3F3AP84243 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.95□□□□□ -0.34
H3F3AP84243 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H3F3AP84243 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.95□□□□□ -0.34
H3F3AP84243 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms