Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.07□□□□□ -0.16
ERFP50548 ACTG1P14-201ENST00000446382 1122 ntBASIC14.07□□□□□ -0.16
ERFP50548 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.07□□□□□ -0.16
ERFP50548 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.07□□□□□ -0.16
ERFP50548 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ERFP50548 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
ERFP50548 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.07□□□□□ -0.16
ERFP50548 AC022145.2-201ENST00000598203 171 ntBASIC14.07□□□□□ -0.16
ERFP50548 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.07□□□□□ -0.16
ERFP50548 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ERFP50548 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ERFP50548 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.07□□□□□ -0.16
ERFP50548 AC105339.1-204ENST00000636249 355 ntBASIC14.07□□□□□ -0.16
ERFP50548 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
ERFP50548 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.07□□□□□ -0.16
ERFP50548 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERFP50548 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERFP50548 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERFP50548 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ERFP50548 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
ERFP50548 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERFP50548 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERFP50548 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERFP50548 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERFP50548 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ERFP50548 AL136172.1-201ENST00000598590 1394 ntBASIC14.07□□□□□ -0.16
ERFP50548 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERFP50548 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERFP50548 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ERFP50548 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.07□□□□□ -0.16
ERFP50548 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERFP50548 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERFP50548 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ERFP50548 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERFP50548 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ERFP50548 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC14.06□□□□□ -0.16
ERFP50548 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.06□□□□□ -0.16
ERFP50548 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERFP50548 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERFP50548 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.06□□□□□ -0.16
ERFP50548 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERFP50548 AP003969.2-201ENST00000623739 2275 ntBASIC14.06□□□□□ -0.16
ERFP50548 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC14.06□□□□□ -0.16
ERFP50548 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ERFP50548 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
ERFP50548 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
ERFP50548 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERFP50548 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
ERFP50548 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.06□□□□□ -0.16
ERFP50548 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.06□□□□□ -0.16
ERFP50548 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.06□□□□□ -0.16
ERFP50548 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ERFP50548 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.06□□□□□ -0.16
ERFP50548 AL079307.3-201ENST00000556114 283 ntBASIC14.06□□□□□ -0.16
ERFP50548 AC026150.2-201ENST00000564693 1156 ntBASIC14.06□□□□□ -0.16
ERFP50548 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERFP50548 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ERFP50548 MIR6069-201ENST00000620069 79 ntBASIC14.06□□□□□ -0.16
ERFP50548 AC084121.4-201ENST00000641598 221 ntBASIC14.06□□□□□ -0.16
ERFP50548 AF228730.8-201ENST00000642140 221 ntBASIC14.06□□□□□ -0.16
ERFP50548 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ERFP50548 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
ERFP50548 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERFP50548 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.06□□□□□ -0.16
ERFP50548 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERFP50548 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
ERFP50548 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.06□□□□□ -0.16
ERFP50548 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERFP50548 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ERFP50548 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC14.06□□□□□ -0.16
ERFP50548 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
ERFP50548 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ERFP50548 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERFP50548 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.06□□□□□ -0.16
ERFP50548 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.06□□□□□ -0.16
ERFP50548 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERFP50548 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERFP50548 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ERFP50548 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.06□□□□□ -0.16
ERFP50548 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
ERFP50548 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ERFP50548 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERFP50548 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC14.05□□□□□ -0.16
ERFP50548 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
ERFP50548 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERFP50548 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ERFP50548 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERFP50548 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.05□□□□□ -0.16
ERFP50548 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERFP50548 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ERFP50548 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERFP50548 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERFP50548 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERFP50548 AL021155.1-201ENST00000438808 2637 ntBASIC14.05□□□□□ -0.16
ERFP50548 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERFP50548 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERFP50548 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.05□□□□□ -0.16
ERFP50548 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ERFP50548 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
ERFP50548 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms