Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.91□□□□□ -0.34
CD40LGP29965 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
CD40LGP29965 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CD40LGP29965 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 REXO1L1P-201ENST00000379010 6598 ntBASIC12.91□□□□□ -0.34
CD40LGP29965 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.91□□□□□ -0.34
CD40LGP29965 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CD40LGP29965 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.91□□□□□ -0.34
CD40LGP29965 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD40LGP29965 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.9□□□□□ -0.34
CD40LGP29965 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CD40LGP29965 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.9□□□□□ -0.34
CD40LGP29965 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.9□□□□□ -0.34
CD40LGP29965 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.9□□□□□ -0.34
CD40LGP29965 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CD40LGP29965 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.9□□□□□ -0.34
CD40LGP29965 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
CD40LGP29965 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CD40LGP29965 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.9□□□□□ -0.34
CD40LGP29965 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.9□□□□□ -0.34
CD40LGP29965 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.9□□□□□ -0.34
CD40LGP29965 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.9□□□□□ -0.34
CD40LGP29965 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.9□□□□□ -0.34
CD40LGP29965 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.9□□□□□ -0.34
CD40LGP29965 KRT8P23-201ENST00000560090 1207 ntBASIC12.9□□□□□ -0.34
CD40LGP29965 AL138918.1-201ENST00000568306 659 ntBASIC12.9□□□□□ -0.34
CD40LGP29965 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 MIR4469-201ENST00000583919 79 ntBASIC12.9□□□□□ -0.34
CD40LGP29965 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CD40LGP29965 AC009955.4-201ENST00000597192 544 ntBASIC12.9□□□□□ -0.34
CD40LGP29965 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CD40LGP29965 AC008267.7-201ENST00000624570 1194 ntBASIC12.9□□□□□ -0.34
CD40LGP29965 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CD40LGP29965 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CD40LGP29965 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.9□□□□□ -0.34
CD40LGP29965 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CD40LGP29965 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CD40LGP29965 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CD40LGP29965 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CD40LGP29965 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD40LGP29965 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.9□□□□□ -0.34
CD40LGP29965 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
CD40LGP29965 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CD40LGP29965 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.9□□□□□ -0.35
CD40LGP29965 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
CD40LGP29965 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
CD40LGP29965 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD40LGP29965 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.89□□□□□ -0.35
CD40LGP29965 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40LGP29965 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.89□□□□□ -0.35
CD40LGP29965 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CD40LGP29965 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.89□□□□□ -0.35
CD40LGP29965 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.89□□□□□ -0.35
CD40LGP29965 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.89□□□□□ -0.35
CD40LGP29965 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12.89□□□□□ -0.35
CD40LGP29965 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD40LGP29965 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.89□□□□□ -0.35
CD40LGP29965 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
CD40LGP29965 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CD40LGP29965 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40LGP29965 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD40LGP29965 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.89□□□□□ -0.35
CD40LGP29965 ABCD1P2-201ENST00000429313 1601 ntBASIC12.89□□□□□ -0.35
CD40LGP29965 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.89□□□□□ -0.35
CD40LGP29965 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40LGP29965 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD40LGP29965 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms