Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.18□□□□□ -0.46
LMO1P25800 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.18□□□□□ -0.46
LMO1P25800 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LMO1P25800 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LMO1P25800 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
LMO1P25800 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LMO1P25800 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
LMO1P25800 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
LMO1P25800 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.18□□□□□ -0.46
LMO1P25800 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO1P25800 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
LMO1P25800 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
LMO1P25800 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO1P25800 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.18□□□□□ -0.46
LMO1P25800 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
LMO1P25800 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
LMO1P25800 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
LMO1P25800 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.18□□□□□ -0.46
LMO1P25800 AC026954.1-201ENST00000429771 1293 ntBASIC12.18□□□□□ -0.46
LMO1P25800 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.18□□□□□ -0.46
LMO1P25800 FAM58BP-201ENST00000439056 645 ntBASIC12.18□□□□□ -0.46
LMO1P25800 HIST2H2BB-201ENST00000449108 381 ntBASIC12.18□□□□□ -0.46
LMO1P25800 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO1P25800 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO1P25800 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO1P25800 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO1P25800 KRT17P8-201ENST00000540749 863 ntBASIC12.18□□□□□ -0.46
LMO1P25800 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.18□□□□□ -0.46
LMO1P25800 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO1P25800 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.18□□□□□ -0.46
LMO1P25800 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.18□□□□□ -0.46
LMO1P25800 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
LMO1P25800 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO1P25800 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LMO1P25800 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO1P25800 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO1P25800 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO1P25800 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO1P25800 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.18□□□□□ -0.46
LMO1P25800 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO1P25800 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LMO1P25800 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 REXO1L6P-201ENST00000603433 1515 ntBASIC12.17□□□□□ -0.46
LMO1P25800 TMBIM7P-202ENST00000641474 1516 ntBASIC12.17□□□□□ -0.46
LMO1P25800 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO1P25800 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.17□□□□□ -0.46
LMO1P25800 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
LMO1P25800 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 AL022313.4-201ENST00000562756 2046 ntBASIC12.17□□□□□ -0.46
LMO1P25800 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
LMO1P25800 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LMO1P25800 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.17□□□□□ -0.46
LMO1P25800 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LMO1P25800 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.17□□□□□ -0.46
LMO1P25800 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.17□□□□□ -0.46
LMO1P25800 AL645933.1-201ENST00000440087 609 ntBASIC12.17□□□□□ -0.46
LMO1P25800 ST13P19-201ENST00000442505 1124 ntBASIC12.17□□□□□ -0.46
LMO1P25800 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.17□□□□□ -0.46
LMO1P25800 CTBP2P5-201ENST00000454986 1264 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms