Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.21□□□□□ -0.45
CD74P04233 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CD74P04233 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD74P04233 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD74P04233 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD74P04233 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD74P04233 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD74P04233 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.21□□□□□ -0.45
CD74P04233 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.21□□□□□ -0.45
CD74P04233 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD74P04233 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
CD74P04233 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD74P04233 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.21□□□□□ -0.45
CD74P04233 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.21□□□□□ -0.45
CD74P04233 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD74P04233 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.21□□□□□ -0.45
CD74P04233 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.21□□□□□ -0.45
CD74P04233 AC027369.6-201ENST00000525520 931 ntBASIC12.21□□□□□ -0.45
CD74P04233 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.21□□□□□ -0.45
CD74P04233 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CD74P04233 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.21□□□□□ -0.45
CD74P04233 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.21□□□□□ -0.45
CD74P04233 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.21□□□□□ -0.45
CD74P04233 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.21□□□□□ -0.45
CD74P04233 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.21□□□□□ -0.45
CD74P04233 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.21□□□□□ -0.45
CD74P04233 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.21□□□□□ -0.45
CD74P04233 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.21□□□□□ -0.45
CD74P04233 SRD5A3P1-201ENST00000603021 949 ntBASIC12.21□□□□□ -0.45
CD74P04233 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CD74P04233 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.21□□□□□ -0.45
CD74P04233 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.21□□□□□ -0.45
CD74P04233 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CD74P04233 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD74P04233 LINC01165-201ENST00000445190 1623 ntBASIC12.21□□□□□ -0.46
CD74P04233 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CD74P04233 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD74P04233 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD74P04233 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD74P04233 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.46
CD74P04233 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CD74P04233 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD74P04233 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CD74P04233 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD74P04233 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CD74P04233 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.21□□□□□ -0.46
CD74P04233 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD74P04233 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD74P04233 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CD74P04233 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CD74P04233 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CD74P04233 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CD74P04233 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CD74P04233 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.21□□□□□ -0.46
CD74P04233 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CD74P04233 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CD74P04233 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CD74P04233 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CD74P04233 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
CD74P04233 KRT8P28-201ENST00000433288 1390 ntBASIC12.2□□□□□ -0.46
CD74P04233 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CD74P04233 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CD74P04233 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CD74P04233 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CD74P04233 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CD74P04233 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 ACTBP8-201ENST00000403258 1108 ntBASIC12.2□□□□□ -0.46
CD74P04233 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.2□□□□□ -0.46
CD74P04233 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.2□□□□□ -0.46
CD74P04233 PUDPP3-201ENST00000445368 636 ntBASIC12.2□□□□□ -0.46
CD74P04233 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.2□□□□□ -0.46
CD74P04233 AP001582.1-201ENST00000525856 295 ntBASIC12.2□□□□□ -0.46
CD74P04233 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.2□□□□□ -0.46
CD74P04233 AC120045.2-201ENST00000567334 178 ntBASIC12.2□□□□□ -0.46
CD74P04233 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.2□□□□□ -0.46
CD74P04233 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.2□□□□□ -0.46
CD74P04233 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.2□□□□□ -0.46
CD74P04233 AL445209.1-201ENST00000607269 3491 ntBASIC12.2□□□□□ -0.46
CD74P04233 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CD74P04233 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
CD74P04233 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms