Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.93□□□□□ -0.34
APOC1P02654 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.93□□□□□ -0.34
APOC1P02654 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.93□□□□□ -0.34
APOC1P02654 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.93□□□□□ -0.34
APOC1P02654 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
APOC1P02654 AC138761.1-201ENST00000584393 385 ntBASIC12.93□□□□□ -0.34
APOC1P02654 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.93□□□□□ -0.34
APOC1P02654 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.93□□□□□ -0.34
APOC1P02654 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.93□□□□□ -0.34
APOC1P02654 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.93□□□□□ -0.34
APOC1P02654 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.93□□□□□ -0.34
APOC1P02654 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
APOC1P02654 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
APOC1P02654 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
APOC1P02654 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.93□□□□□ -0.34
APOC1P02654 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
APOC1P02654 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
APOC1P02654 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOC1P02654 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.93□□□□□ -0.34
APOC1P02654 AC215219.1-201ENST00000400706 1817 ntBASIC12.92□□□□□ -0.34
APOC1P02654 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.92□□□□□ -0.34
APOC1P02654 CLUHP2-201ENST00000426660 1303 ntBASIC12.92□□□□□ -0.34
APOC1P02654 FKBP4P6-201ENST00000457486 1332 ntBASIC12.92□□□□□ -0.34
APOC1P02654 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.92□□□□□ -0.34
APOC1P02654 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
APOC1P02654 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
APOC1P02654 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 RN7SKP230-201ENST00000365642 335 ntBASIC12.92□□□□□ -0.34
APOC1P02654 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.92□□□□□ -0.34
APOC1P02654 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.92□□□□□ -0.34
APOC1P02654 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
APOC1P02654 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.92□□□□□ -0.34
APOC1P02654 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.92□□□□□ -0.34
APOC1P02654 POM121L8P-201ENST00000417732 1281 ntBASIC12.92□□□□□ -0.34
APOC1P02654 C2orf27AP3-201ENST00000434123 579 ntBASIC12.92□□□□□ -0.34
APOC1P02654 POM121L9P-203ENST00000441984 1285 ntBASIC12.92□□□□□ -0.34
APOC1P02654 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.92□□□□□ -0.34
APOC1P02654 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 AC015936.2-201ENST00000593177 259 ntBASIC12.92□□□□□ -0.34
APOC1P02654 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.92□□□□□ -0.34
APOC1P02654 AL354718.3-201ENST00000616414 581 ntBASIC12.92□□□□□ -0.34
APOC1P02654 CR382287.1-201ENST00000623954 586 ntBASIC12.92□□□□□ -0.34
APOC1P02654 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.92□□□□□ -0.34
APOC1P02654 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.92□□□□□ -0.34
APOC1P02654 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
APOC1P02654 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.92□□□□□ -0.34
APOC1P02654 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
APOC1P02654 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.92□□□□□ -0.34
APOC1P02654 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOC1P02654 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
APOC1P02654 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
APOC1P02654 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOC1P02654 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms