Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.76□□□□□ -0.21
UPK1AO00322 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK1AO00322 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.76□□□□□ -0.21
UPK1AO00322 ZACNP1-201ENST00000612259 710 ntBASIC13.76□□□□□ -0.21
UPK1AO00322 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
UPK1AO00322 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.76□□□□□ -0.21
UPK1AO00322 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
UPK1AO00322 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
UPK1AO00322 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
UPK1AO00322 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.76□□□□□ -0.21
UPK1AO00322 NCLP1-201ENST00000445357 1963 ntBASIC13.76□□□□□ -0.21
UPK1AO00322 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
UPK1AO00322 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
UPK1AO00322 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.75□□□□□ -0.21
UPK1AO00322 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
UPK1AO00322 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
UPK1AO00322 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
UPK1AO00322 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 AC079776.1-201ENST00000401540 1152 ntBASIC13.75□□□□□ -0.21
UPK1AO00322 AC005034.1-201ENST00000426657 489 ntBASIC13.75□□□□□ -0.21
UPK1AO00322 AC026954.1-201ENST00000429771 1293 ntBASIC13.75□□□□□ -0.21
UPK1AO00322 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.75□□□□□ -0.21
UPK1AO00322 AC234783.1-201ENST00000441761 496 ntBASIC13.75□□□□□ -0.21
UPK1AO00322 CHMP1AP1-201ENST00000445563 662 ntBASIC13.75□□□□□ -0.21
UPK1AO00322 KLF2P4-201ENST00000451959 1225 ntBASIC13.75□□□□□ -0.21
UPK1AO00322 CTBP2P5-201ENST00000454986 1264 ntBASIC13.75□□□□□ -0.21
UPK1AO00322 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.75□□□□□ -0.21
UPK1AO00322 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.75□□□□□ -0.21
UPK1AO00322 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.75□□□□□ -0.21
UPK1AO00322 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.75□□□□□ -0.21
UPK1AO00322 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.75□□□□□ -0.21
UPK1AO00322 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.75□□□□□ -0.21
UPK1AO00322 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.75□□□□□ -0.21
UPK1AO00322 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.75□□□□□ -0.21
UPK1AO00322 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
UPK1AO00322 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
UPK1AO00322 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.75□□□□□ -0.21
UPK1AO00322 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.75□□□□□ -0.21
UPK1AO00322 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.75□□□□□ -0.21
UPK1AO00322 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.75□□□□□ -0.21
UPK1AO00322 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.75□□□□□ -0.21
UPK1AO00322 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1AO00322 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.75□□□□□ -0.21
UPK1AO00322 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.74□□□□□ -0.21
UPK1AO00322 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
UPK1AO00322 KRT8P28-201ENST00000433288 1390 ntBASIC13.74□□□□□ -0.21
UPK1AO00322 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.74□□□□□ -0.21
UPK1AO00322 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1AO00322 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.74□□□□□ -0.21
UPK1AO00322 CNN2P10-201ENST00000443067 918 ntBASIC13.74□□□□□ -0.21
UPK1AO00322 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.74□□□□□ -0.21
UPK1AO00322 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
UPK1AO00322 RAB43P1-201ENST00000561790 589 ntBASIC13.74□□□□□ -0.21
UPK1AO00322 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.74□□□□□ -0.21
UPK1AO00322 PPY2P-201ENST00000582808 702 ntBASIC13.74□□□□□ -0.21
UPK1AO00322 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms