Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 AC026740.1-201ENST00000607068 791 ntBASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 AC091544.8-201ENST00000619490 361 ntBASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 OR2I1P-210ENST00000642037 4691 ntBASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZNF304Q9HCX3 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 AC144522.1-201ENST00000625111 1658 ntBASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 KRT8P28-201ENST00000433288 1390 ntBASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 AC136759.1-202ENST00000530858 2194 ntBASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 AL132994.2-201ENST00000603120 687 ntBASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 AL645939.5-201ENST00000606834 243 ntBASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 AL805961.1-203ENST00000641078 1258 ntBASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ZNF304Q9HCX3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF304Q9HCX3 FAM90A7P-201ENST00000382628 1395 ntBASIC13.84□□□□□ -0.19
ZNF304Q9HCX3 FAM90A23P-201ENST00000400136 1395 ntBASIC13.84□□□□□ -0.19
ZNF304Q9HCX3 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF304Q9HCX3 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ZNF304Q9HCX3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.84□□□□□ -0.19
ZNF304Q9HCX3 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
ZNF304Q9HCX3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF304Q9HCX3 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF304Q9HCX3 AC006504.5-208ENST00000588784 2401 ntBASIC13.84□□□□□ -0.19
ZNF304Q9HCX3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF304Q9HCX3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.84□□□□□ -0.19
ZNF304Q9HCX3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF304Q9HCX3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF304Q9HCX3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF304Q9HCX3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZNF304Q9HCX3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
ZNF304Q9HCX3 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms