Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 GOLGA8IP-202ENST00000611635 2100 ntBASIC11.83□□□□□ -0.52
RAB40CQ96S21 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 BAD-202ENST00000394531 631 ntTSL 3 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 FAM86LP-201ENST00000478302 853 ntBASIC11.83□□□□□ -0.52
RAB40CQ96S21 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 GCOM2-201ENST00000509133 1104 ntBASIC11.83□□□□□ -0.52
RAB40CQ96S21 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 AC069120.2-201ENST00000524091 540 ntBASIC11.83□□□□□ -0.52
RAB40CQ96S21 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 BAD-207ENST00000544785 525 ntTSL 3 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 AL049840.4-201ENST00000602422 811 ntBASIC11.83□□□□□ -0.52
RAB40CQ96S21 AL391069.4-201ENST00000609583 481 ntBASIC11.83□□□□□ -0.52
RAB40CQ96S21 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 TEX48-202ENST00000612244 662 ntTSL 3 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 AC073592.8-201ENST00000624126 511 ntBASIC11.83□□□□□ -0.52
RAB40CQ96S21 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB40CQ96S21 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB40CQ96S21 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 AC107890.1-201ENST00000422478 521 ntBASIC11.82□□□□□ -0.52
RAB40CQ96S21 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB40CQ96S21 AC114501.2-201ENST00000439631 535 ntBASIC11.82□□□□□ -0.52
RAB40CQ96S21 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB40CQ96S21 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms