Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 AC073210.1-201ENST00000414799 232 ntBASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 ASS1P2-201ENST00000439895 1223 ntBASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 AL359091.4-201ENST00000610052 409 ntBASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 ESR1-214ENST00000638569 132 ntTSL 5 BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CFAP43Q8NDM7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
CFAP43Q8NDM7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC21.95■■□□□ 1.11
CFAP43Q8NDM7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
CFAP43Q8NDM7 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 GOLGA2P8-201ENST00000505201 779 ntBASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 ANKRD26P1-203ENST00000569528 966 ntBASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 HSPA7-201ENST00000445535 1927 ntBASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 CICP16-201ENST00000502609 2813 ntBASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 HMGA1P1-201ENST00000415560 1062 ntBASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 CES1P2-201ENST00000566467 1242 ntBASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 HNRNPA1P16-201ENST00000575692 955 ntBASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 AC091769.1-201ENST00000619576 568 ntBASIC21.95■■□□□ 1.1
CFAP43Q8NDM7 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 KRT8P30-201ENST00000432100 650 ntBASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 PHF23-213ENST00000613632 850 ntTSL 5 BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 PDXDC2P-206ENST00000534700 1315 ntBASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CFAP43Q8NDM7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CFAP43Q8NDM7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CFAP43Q8NDM7 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CFAP43Q8NDM7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CFAP43Q8NDM7 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC21.93■■□□□ 1.1
CFAP43Q8NDM7 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CFAP43Q8NDM7 AC092573.1-201ENST00000433054 884 ntBASIC21.93■■□□□ 1.1
CFAP43Q8NDM7 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC21.93■■□□□ 1.1
CFAP43Q8NDM7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CFAP43Q8NDM7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CFAP43Q8NDM7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC21.93■■□□□ 1.1
CFAP43Q8NDM7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CFAP43Q8NDM7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CFAP43Q8NDM7 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms