Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 FAM90A7P-201ENST00000382628 1395 ntBASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 FAM90A23P-201ENST00000400136 1395 ntBASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 ST13P19-201ENST00000442505 1124 ntBASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 SERPINA13P-202ENST00000478994 924 ntBASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 AC006122.1-201ENST00000493323 440 ntBASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 HLA-J-204ENST00000495278 958 ntBASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 RNA5SP423-201ENST00000517127 109 ntBASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 AC044849.1-201ENST00000519737 1188 ntBASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 AC243960.2-201ENST00000600996 747 ntBASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 AL022328.3-201ENST00000607943 679 ntBASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCUBE3Q8IX30 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 AC064801.2-201ENST00000625052 1303 ntBASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 NKAIN1P1-201ENST00000435754 582 ntBASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 AC004898.1-201ENST00000451057 766 ntBASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 AL136370.1-201ENST00000608166 691 ntBASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 AC068587.8-201ENST00000641239 219 ntBASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.28■□□□□ 0.04
SCUBE3Q8IX30 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCUBE3Q8IX30 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms