Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.56□□□□□ -0.4
ACTBP60709 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.56□□□□□ -0.4
ACTBP60709 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
ACTBP60709 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.56□□□□□ -0.4
ACTBP60709 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.56□□□□□ -0.4
ACTBP60709 AC005498.2-205ENST00000593218 784 ntBASIC12.56□□□□□ -0.4
ACTBP60709 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ACTBP60709 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.56□□□□□ -0.4
ACTBP60709 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
ACTBP60709 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.56□□□□□ -0.4
ACTBP60709 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.56□□□□□ -0.4
ACTBP60709 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ACTBP60709 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.56□□□□□ -0.4
ACTBP60709 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.56□□□□□ -0.4
ACTBP60709 MRPL37P1-201ENST00000592451 1337 ntBASIC12.56□□□□□ -0.4
ACTBP60709 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
ACTBP60709 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ACTBP60709 AL365181.3-201ENST00000605886 3222 ntBASIC12.56□□□□□ -0.4
ACTBP60709 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.56□□□□□ -0.4
ACTBP60709 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.56□□□□□ -0.4
ACTBP60709 AC022144.1-201ENST00000602255 1580 ntBASIC12.56□□□□□ -0.4
ACTBP60709 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.56□□□□□ -0.4
ACTBP60709 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ACTBP60709 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.55□□□□□ -0.4
ACTBP60709 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
ACTBP60709 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.55□□□□□ -0.4
ACTBP60709 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
ACTBP60709 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ACTBP60709 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.55□□□□□ -0.4
ACTBP60709 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
ACTBP60709 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.55□□□□□ -0.4
ACTBP60709 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.55□□□□□ -0.4
ACTBP60709 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.55□□□□□ -0.4
ACTBP60709 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
ACTBP60709 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.55□□□□□ -0.4
ACTBP60709 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.55□□□□□ -0.4
ACTBP60709 AC114501.2-201ENST00000439631 535 ntBASIC12.55□□□□□ -0.4
ACTBP60709 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.55□□□□□ -0.4
ACTBP60709 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.55□□□□□ -0.4
ACTBP60709 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.55□□□□□ -0.4
ACTBP60709 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 AC009407.1-201ENST00000568958 598 ntBASIC12.55□□□□□ -0.4
ACTBP60709 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.55□□□□□ -0.4
ACTBP60709 KRT18P8-201ENST00000581937 1246 ntBASIC12.55□□□□□ -0.4
ACTBP60709 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.55□□□□□ -0.4
ACTBP60709 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ACTBP60709 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.55□□□□□ -0.4
ACTBP60709 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ACTBP60709 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ACTBP60709 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ACTBP60709 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.54□□□□□ -0.4
ACTBP60709 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ACTBP60709 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.54□□□□□ -0.4
ACTBP60709 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
ACTBP60709 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ACTBP60709 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms