Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 TMCO4-202ENST00000375127 2403 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 USP47-202ENST00000339865 7775 ntTSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 OSBPL7-202ENST00000392507 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 AC010997.4-201ENST00000609200 1890 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 RGS9-203ENST00000449996 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 SLC44A4-210ENST00000544672 2634 ntTSL 2 BASIC10.87□□□□□ -0.67
HIST1H2BDP58876 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 CTCFL-217ENST00000608425 2915 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 POM121L7P-201ENST00000329949 2404 ntBASIC10.86□□□□□ -0.67
HIST1H2BDP58876 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 NSUN5P1-202ENST00000421140 1535 ntBASIC10.86□□□□□ -0.67
HIST1H2BDP58876 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 AL645929.1-201ENST00000420084 975 ntBASIC10.86□□□□□ -0.67
HIST1H2BDP58876 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 RPS15P9-201ENST00000494093 319 ntBASIC10.86□□□□□ -0.67
HIST1H2BDP58876 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 MIR4785-201ENST00000585005 73 ntBASIC10.86□□□□□ -0.67
HIST1H2BDP58876 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 SDCCAG3P1-201ENST00000589292 1150 ntBASIC10.86□□□□□ -0.67
HIST1H2BDP58876 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 AL009183.1-201ENST00000603760 355 ntBASIC10.86□□□□□ -0.67
HIST1H2BDP58876 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 AL139288.1-201ENST00000623748 933 ntBASIC10.86□□□□□ -0.67
HIST1H2BDP58876 DFFB-212ENST00000625756 649 ntTSL 5 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 HK2P1-201ENST00000447818 2737 ntBASIC10.86□□□□□ -0.67
HIST1H2BDP58876 NBR1-202ENST00000542611 2703 ntTSL 2 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 NLRP2-206ENST00000427260 3411 ntTSL 2 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 AC233702.3-201ENST00000578656 1387 ntBASIC10.86□□□□□ -0.67
HIST1H2BDP58876 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HIST1H2BDP58876 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 EIF3C-209ENST00000566501 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 SLC16A7-203ENST00000547379 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 AC015688.4-201ENST00000580780 1647 ntBASIC10.85□□□□□ -0.67
HIST1H2BDP58876 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC10.85□□□□□ -0.67
HIST1H2BDP58876 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms