Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.1□□□□□ -0.31
SUMO3P55854 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SUMO3P55854 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.1□□□□□ -0.31
SUMO3P55854 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.1□□□□□ -0.31
SUMO3P55854 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.1□□□□□ -0.31
SUMO3P55854 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SUMO3P55854 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
SUMO3P55854 AC139749.1-202ENST00000617529 3139 ntBASIC13.1□□□□□ -0.31
SUMO3P55854 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 CCT8L1P-201ENST00000465400 1674 ntBASIC13.1□□□□□ -0.31
SUMO3P55854 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
SUMO3P55854 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.1□□□□□ -0.31
SUMO3P55854 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.1□□□□□ -0.31
SUMO3P55854 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SUMO3P55854 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.1□□□□□ -0.31
SUMO3P55854 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.1□□□□□ -0.31
SUMO3P55854 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.1□□□□□ -0.31
SUMO3P55854 AC092658.1-201ENST00000505836 891 ntBASIC13.1□□□□□ -0.31
SUMO3P55854 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SUMO3P55854 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.1□□□□□ -0.31
SUMO3P55854 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.1□□□□□ -0.31
SUMO3P55854 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.1□□□□□ -0.31
SUMO3P55854 AL118558.3-201ENST00000607414 1079 ntBASIC13.1□□□□□ -0.31
SUMO3P55854 AC138649.2-201ENST00000615886 705 ntBASIC13.1□□□□□ -0.31
SUMO3P55854 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
SUMO3P55854 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.1□□□□□ -0.31
SUMO3P55854 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SUMO3P55854 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
SUMO3P55854 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.1□□□□□ -0.31
SUMO3P55854 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.1□□□□□ -0.31
SUMO3P55854 KRT8P24-201ENST00000560290 1559 ntBASIC13.1□□□□□ -0.31
SUMO3P55854 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.1□□□□□ -0.31
SUMO3P55854 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 AL359881.3-201ENST00000602640 1721 ntBASIC13.1□□□□□ -0.31
SUMO3P55854 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SUMO3P55854 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.1□□□□□ -0.31
SUMO3P55854 AC090643.2-201ENST00000623442 2029 ntBASIC13.1□□□□□ -0.31
SUMO3P55854 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.1□□□□□ -0.31
SUMO3P55854 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
SUMO3P55854 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.1□□□□□ -0.31
SUMO3P55854 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SUMO3P55854 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.09□□□□□ -0.31
SUMO3P55854 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.09□□□□□ -0.31
SUMO3P55854 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SUMO3P55854 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.09□□□□□ -0.31
SUMO3P55854 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.09□□□□□ -0.31
SUMO3P55854 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.09□□□□□ -0.31
SUMO3P55854 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.09□□□□□ -0.31
SUMO3P55854 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SUMO3P55854 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.09□□□□□ -0.31
SUMO3P55854 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SUMO3P55854 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.09□□□□□ -0.31
SUMO3P55854 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.09□□□□□ -0.31
SUMO3P55854 AL008707.1-201ENST00000422498 534 ntBASIC13.09□□□□□ -0.31
SUMO3P55854 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.09□□□□□ -0.31
SUMO3P55854 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.09□□□□□ -0.31
SUMO3P55854 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.09□□□□□ -0.31
SUMO3P55854 AC011742.3-201ENST00000439053 820 ntBASIC13.09□□□□□ -0.31
SUMO3P55854 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.09□□□□□ -0.31
SUMO3P55854 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.09□□□□□ -0.31
SUMO3P55854 AC125604.1-201ENST00000496255 707 ntBASIC13.09□□□□□ -0.31
SUMO3P55854 RCC2P8-201ENST00000502779 1035 ntBASIC13.09□□□□□ -0.31
SUMO3P55854 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.09□□□□□ -0.31
SUMO3P55854 AC044849.1-201ENST00000519737 1188 ntBASIC13.09□□□□□ -0.31
SUMO3P55854 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.09□□□□□ -0.31
SUMO3P55854 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.09□□□□□ -0.31
SUMO3P55854 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.09□□□□□ -0.31
SUMO3P55854 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms