Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
MTHFRP42898 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
MTHFRP42898 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.15■□□□□ 0.02
MTHFRP42898 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MTHFRP42898 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MTHFRP42898 TEKT4P2-202ENST00000559466 1312 ntBASIC15.15■□□□□ 0.02
MTHFRP42898 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MTHFRP42898 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.15■□□□□ 0.02
MTHFRP42898 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
MTHFRP42898 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
MTHFRP42898 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.14■□□□□ 0.01
MTHFRP42898 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.14■□□□□ 0.01
MTHFRP42898 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
MTHFRP42898 AL136172.1-201ENST00000598590 1394 ntBASIC15.14■□□□□ 0.01
MTHFRP42898 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.14■□□□□ 0.01
MTHFRP42898 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
MTHFRP42898 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 PCDHA3-202ENST00000532566 4594 ntBASIC15.14■□□□□ 0.01
MTHFRP42898 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC15.14■□□□□ 0.01
MTHFRP42898 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC15.14■□□□□ 0.01
MTHFRP42898 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC15.14■□□□□ 0.01
MTHFRP42898 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC15.14■□□□□ 0.01
MTHFRP42898 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC15.14■□□□□ 0.01
MTHFRP42898 AC011247.3-201ENST00000603297 438 ntBASIC15.14■□□□□ 0.01
MTHFRP42898 AC140113.1-201ENST00000603467 169 ntBASIC15.14■□□□□ 0.01
MTHFRP42898 AC005041.3-201ENST00000606287 649 ntBASIC15.14■□□□□ 0.01
MTHFRP42898 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
MTHFRP42898 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.14■□□□□ 0.01
MTHFRP42898 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 AL590440.2-201ENST00000641973 1595 ntBASIC15.14■□□□□ 0.01
MTHFRP42898 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.14■□□□□ 0.01
MTHFRP42898 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.14■□□□□ 0.01
MTHFRP42898 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
MTHFRP42898 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.14■□□□□ 0.01
MTHFRP42898 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC15.14■□□□□ 0.01
MTHFRP42898 AC023908.3-201ENST00000564211 3047 ntBASIC15.14■□□□□ 0.01
MTHFRP42898 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MTHFRP42898 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MTHFRP42898 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.13■□□□□ 0.01
MTHFRP42898 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MTHFRP42898 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
MTHFRP42898 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.13■□□□□ 0.01
MTHFRP42898 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MTHFRP42898 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.13■□□□□ 0.01
MTHFRP42898 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.13■□□□□ 0.01
MTHFRP42898 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MTHFRP42898 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
MTHFRP42898 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MTHFRP42898 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MTHFRP42898 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
MTHFRP42898 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MTHFRP42898 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MTHFRP42898 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MTHFRP42898 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MTHFRP42898 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
MTHFRP42898 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
MTHFRP42898 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MTHFRP42898 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.13■□□□□ 0.01
MTHFRP42898 RN7SKP109-201ENST00000410592 316 ntBASIC15.13■□□□□ 0.01
MTHFRP42898 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.13■□□□□ 0.01
MTHFRP42898 HCG27-204ENST00000424675 895 ntTSL 3 BASIC15.13■□□□□ 0.01
MTHFRP42898 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC15.13■□□□□ 0.01
MTHFRP42898 RPL18AP8-201ENST00000486071 528 ntBASIC15.13■□□□□ 0.01
MTHFRP42898 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC15.13■□□□□ 0.01
MTHFRP42898 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
MTHFRP42898 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.13■□□□□ 0.01
MTHFRP42898 MIR2392-201ENST00000584881 84 ntBASIC15.13■□□□□ 0.01
MTHFRP42898 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.13■□□□□ 0.01
MTHFRP42898 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC15.13■□□□□ 0.01
MTHFRP42898 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MTHFRP42898 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.13■□□□□ 0.01
MTHFRP42898 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.13■□□□□ 0.01
MTHFRP42898 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MTHFRP42898 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.13■□□□□ 0.01
MTHFRP42898 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MTHFRP42898 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms