Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.98■□□□□ 0.15
RFC5P40937 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.98■□□□□ 0.15
RFC5P40937 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFC5P40937 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.98■□□□□ 0.15
RFC5P40937 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.98■□□□□ 0.15
RFC5P40937 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.97■□□□□ 0.15
RFC5P40937 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.97■□□□□ 0.15
RFC5P40937 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.97■□□□□ 0.15
RFC5P40937 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.97■□□□□ 0.15
RFC5P40937 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.97■□□□□ 0.15
RFC5P40937 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.97■□□□□ 0.15
RFC5P40937 AC116345.2-201ENST00000512837 523 ntBASIC15.97■□□□□ 0.15
RFC5P40937 RTN3P1-201ENST00000536295 711 ntBASIC15.97■□□□□ 0.15
RFC5P40937 AC105129.2-201ENST00000559536 390 ntBASIC15.97■□□□□ 0.15
RFC5P40937 AC093752.3-201ENST00000567343 901 ntBASIC15.97■□□□□ 0.15
RFC5P40937 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 AC010326.4-201ENST00000604665 891 ntBASIC15.97■□□□□ 0.15
RFC5P40937 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.97■□□□□ 0.15
RFC5P40937 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RFC5P40937 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RFC5P40937 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.97■□□□□ 0.15
RFC5P40937 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.97■□□□□ 0.15
RFC5P40937 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.97■□□□□ 0.15
RFC5P40937 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
RFC5P40937 AC015656.1-201ENST00000624209 3578 ntBASIC15.97■□□□□ 0.15
RFC5P40937 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFC5P40937 GRK6P1-201ENST00000400595 1711 ntBASIC15.97■□□□□ 0.15
RFC5P40937 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.97■□□□□ 0.15
RFC5P40937 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.96■□□□□ 0.15
RFC5P40937 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.96■□□□□ 0.15
RFC5P40937 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFC5P40937 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC5P40937 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.96■□□□□ 0.15
RFC5P40937 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RFC5P40937 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC5P40937 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RFC5P40937 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.96■□□□□ 0.15
RFC5P40937 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.96■□□□□ 0.15
RFC5P40937 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.96■□□□□ 0.15
RFC5P40937 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC5P40937 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC5P40937 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC5P40937 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RFC5P40937 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
RFC5P40937 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RFC5P40937 AC015909.3-201ENST00000572855 1794 ntBASIC15.96■□□□□ 0.15
RFC5P40937 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.96■□□□□ 0.15
RFC5P40937 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
RFC5P40937 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.96■□□□□ 0.15
RFC5P40937 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC5P40937 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.96■□□□□ 0.15
RFC5P40937 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFC5P40937 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.96■□□□□ 0.15
RFC5P40937 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC5P40937 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC5P40937 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFC5P40937 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC5P40937 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.96■□□□□ 0.15
RFC5P40937 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.96■□□□□ 0.15
RFC5P40937 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFC5P40937 RHOQP1-201ENST00000555758 579 ntBASIC15.96■□□□□ 0.15
RFC5P40937 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RFC5P40937 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.96■□□□□ 0.15
RFC5P40937 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.96■□□□□ 0.15
RFC5P40937 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.96■□□□□ 0.15
RFC5P40937 LINC01783-202ENST00000614408 828 ntBASIC15.96■□□□□ 0.15
RFC5P40937 BX284668.2-205ENST00000619677 828 ntBASIC15.96■□□□□ 0.15
RFC5P40937 AC079336.7-201ENST00000623428 1078 ntBASIC15.96■□□□□ 0.15
RFC5P40937 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC5P40937 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC5P40937 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFC5P40937 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC5P40937 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.96■□□□□ 0.15
RFC5P40937 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFC5P40937 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
RFC5P40937 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms