Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
CFTRP13569 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC23.84■■□□□ 1.41
CFTRP13569 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC23.84■■□□□ 1.41
CFTRP13569 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CFTRP13569 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CFTRP13569 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC23.84■■□□□ 1.41
CFTRP13569 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC23.84■■□□□ 1.41
CFTRP13569 RBP4-203ENST00000371469 814 ntTSL 5 BASIC23.84■■□□□ 1.41
CFTRP13569 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
CFTRP13569 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
CFTRP13569 OR4C14P-201ENST00000440929 923 ntBASIC23.84■■□□□ 1.41
CFTRP13569 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
CFTRP13569 GYG1-209ENST00000483267 801 ntTSL 2 BASIC23.84■■□□□ 1.41
CFTRP13569 NDUFB2P1-201ENST00000506966 295 ntBASIC23.84■■□□□ 1.41
CFTRP13569 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC23.84■■□□□ 1.41
CFTRP13569 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CFTRP13569 AC138627.1-201ENST00000641127 1257 ntBASIC23.84■■□□□ 1.41
CFTRP13569 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CFTRP13569 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
CFTRP13569 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CFTRP13569 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CFTRP13569 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CFTRP13569 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC23.84■■□□□ 1.41
CFTRP13569 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CFTRP13569 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CFTRP13569 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
CFTRP13569 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CFTRP13569 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC23.83■■□□□ 1.41
CFTRP13569 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CFTRP13569 CASP2-203ENST00000392925 616 ntTSL 3 BASIC23.83■■□□□ 1.41
CFTRP13569 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC23.83■■□□□ 1.41
CFTRP13569 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
CFTRP13569 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC23.83■■□□□ 1.41
CFTRP13569 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC23.83■■□□□ 1.41
CFTRP13569 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC23.83■■□□□ 1.41
CFTRP13569 MYL6-215ENST00000549566 685 ntTSL 2 BASIC23.83■■□□□ 1.41
CFTRP13569 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC23.83■■□□□ 1.41
CFTRP13569 AC089987.1-201ENST00000551654 2209 ntBASIC23.83■■□□□ 1.41
CFTRP13569 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CFTRP13569 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CFTRP13569 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CFTRP13569 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CFTRP13569 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC23.83■■□□□ 1.41
CFTRP13569 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
CFTRP13569 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC23.83■■□□□ 1.41
CFTRP13569 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
CFTRP13569 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC23.83■■□□□ 1.4
CFTRP13569 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CFTRP13569 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CFTRP13569 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CFTRP13569 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CFTRP13569 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CFTRP13569 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CFTRP13569 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC23.82■■□□□ 1.4
CFTRP13569 POLR2LP1-206ENST00000444785 187 ntBASIC23.82■■□□□ 1.4
CFTRP13569 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC23.82■■□□□ 1.4
CFTRP13569 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC23.82■■□□□ 1.4
CFTRP13569 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC23.82■■□□□ 1.4
CFTRP13569 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC23.82■■□□□ 1.4
CFTRP13569 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC23.82■■□□□ 1.4
CFTRP13569 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC23.82■■□□□ 1.4
CFTRP13569 MIR6893-201ENST00000613458 69 ntBASIC23.82■■□□□ 1.4
CFTRP13569 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC23.82■■□□□ 1.4
CFTRP13569 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC23.82■■□□□ 1.4
CFTRP13569 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC23.82■■□□□ 1.4
CFTRP13569 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CFTRP13569 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CFTRP13569 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CFTRP13569 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC23.82■■□□□ 1.4
CFTRP13569 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CFTRP13569 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CFTRP13569 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC23.82■■□□□ 1.4
CFTRP13569 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CFTRP13569 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC23.82■■□□□ 1.4
CFTRP13569 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CFTRP13569 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CFTRP13569 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CFTRP13569 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CFTRP13569 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
CFTRP13569 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CFTRP13569 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC23.81■■□□□ 1.4
CFTRP13569 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC23.81■■□□□ 1.4
CFTRP13569 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC23.81■■□□□ 1.4
CFTRP13569 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC23.81■■□□□ 1.4
CFTRP13569 RN7SL478P-201ENST00000584358 298 ntBASIC23.81■■□□□ 1.4
CFTRP13569 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC23.81■■□□□ 1.4
CFTRP13569 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CFTRP13569 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CFTRP13569 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CFTRP13569 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC23.81■■□□□ 1.4
CFTRP13569 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC23.81■■□□□ 1.4
CFTRP13569 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CFTRP13569 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CFTRP13569 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CFTRP13569 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CFTRP13569 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CFTRP13569 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CFTRP13569 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CFTRP13569 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CFTRP13569 MIR339-201ENST00000362153 94 ntBASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms