Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC11.24□□□□□ -0.61
TRBV12-3P01733 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 HNRNPA1P32-201ENST00000396326 963 ntBASIC11.23□□□□□ -0.61
TRBV12-3P01733 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 FAM58BP-201ENST00000439056 645 ntBASIC11.23□□□□□ -0.61
TRBV12-3P01733 VDAC1P1-201ENST00000439229 848 ntBASIC11.23□□□□□ -0.61
TRBV12-3P01733 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 AC044849.1-201ENST00000519737 1188 ntBASIC11.23□□□□□ -0.61
TRBV12-3P01733 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 AGER-214ENST00000538695 487 ntTSL 2 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 AC005324.6-201ENST00000587972 613 ntBASIC11.23□□□□□ -0.61
TRBV12-3P01733 MIR6869-201ENST00000619434 62 ntBASIC11.23□□□□□ -0.61
TRBV12-3P01733 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TRBV12-3P01733 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
TRBV12-3P01733 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC11.22□□□□□ -0.61
TRBV12-3P01733 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
TRBV12-3P01733 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
TRBV12-3P01733 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRBV12-3P01733 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC11.22□□□□□ -0.61
TRBV12-3P01733 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
TRBV12-3P01733 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
TRBV12-3P01733 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
TRBV12-3P01733 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRBV12-3P01733 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRBV12-3P01733 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRBV12-3P01733 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRBV12-3P01733 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRBV12-3P01733 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
TRBV12-3P01733 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRBV12-3P01733 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRBV12-3P01733 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC11.22□□□□□ -0.61
TRBV12-3P01733 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRBV12-3P01733 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRBV12-3P01733 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
TRBV12-3P01733 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TRBV12-3P01733 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TRBV12-3P01733 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRBV12-3P01733 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRBV12-3P01733 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRBV12-3P01733 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRBV12-3P01733 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRBV12-3P01733 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRBV12-3P01733 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.22□□□□□ -0.61
TRBV12-3P01733 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TRBV12-3P01733 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
TRBV12-3P01733 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC11.22□□□□□ -0.61
TRBV12-3P01733 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC11.22□□□□□ -0.61
TRBV12-3P01733 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC11.22□□□□□ -0.61
TRBV12-3P01733 AL161932.2-201ENST00000435436 679 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms