Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF40O75150 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF40O75150 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF40O75150 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF40O75150 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 AC084364.1-201ENST00000551967 1556 ntBASIC15.82■□□□□ 0.12
RNF40O75150 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF40O75150 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
RNF40O75150 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF40O75150 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RNF40O75150 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF40O75150 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.82■□□□□ 0.12
RNF40O75150 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF40O75150 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF40O75150 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF40O75150 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF40O75150 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF40O75150 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF40O75150 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF40O75150 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF40O75150 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF40O75150 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RNF40O75150 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RNF40O75150 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF40O75150 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF40O75150 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF40O75150 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
RNF40O75150 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF40O75150 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF40O75150 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF40O75150 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.81■□□□□ 0.12
RNF40O75150 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RNF40O75150 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RNF40O75150 AC006033.1-201ENST00000440505 426 ntBASIC15.81■□□□□ 0.12
RNF40O75150 TPT1P11-201ENST00000458482 498 ntBASIC15.81■□□□□ 0.12
RNF40O75150 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF40O75150 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
RNF40O75150 AC078819.1-201ENST00000547454 765 ntBASIC15.81■□□□□ 0.12
RNF40O75150 AC012085.1-201ENST00000548270 765 ntBASIC15.81■□□□□ 0.12
RNF40O75150 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF40O75150 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF40O75150 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF40O75150 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF40O75150 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF40O75150 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF40O75150 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF40O75150 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF40O75150 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF40O75150 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF40O75150 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF40O75150 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF40O75150 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
RNF40O75150 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF40O75150 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF40O75150 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF40O75150 AC016397.2-201ENST00000624848 1985 ntBASIC15.8■□□□□ 0.12
RNF40O75150 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RNF40O75150 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF40O75150 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF40O75150 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF40O75150 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF40O75150 AC015818.8-201ENST00000587907 1519 ntBASIC15.8■□□□□ 0.12
RNF40O75150 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RNF40O75150 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF40O75150 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RNF40O75150 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF40O75150 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF40O75150 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF40O75150 Z97985.1-201ENST00000332270 946 ntBASIC15.8■□□□□ 0.12
RNF40O75150 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF40O75150 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
RNF40O75150 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF40O75150 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF40O75150 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF40O75150 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF40O75150 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC15.8■□□□□ 0.12
RNF40O75150 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF40O75150 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF40O75150 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF40O75150 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF40O75150 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF40O75150 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF40O75150 AP005019.2-201ENST00000615104 511 ntBASIC15.8■□□□□ 0.12
RNF40O75150 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF40O75150 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF40O75150 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RNF40O75150 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RNF40O75150 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF40O75150 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF40O75150 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms