Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
MACF1Q9UPN3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
MACF1Q9UPN3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC9.61□□□□□ -0.87
MACF1Q9UPN3 MDK-213ENST00000617138 635 ntTSL 2 BASIC9.61□□□□□ -0.87
MACF1Q9UPN3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC9.61□□□□□ -0.87
MACF1Q9UPN3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
MACF1Q9UPN3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
MACF1Q9UPN3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC9.61□□□□□ -0.87
MACF1Q9UPN3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
MACF1Q9UPN3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
MACF1Q9UPN3 MIR572-201ENST00000384983 95 ntBASIC9.6□□□□□ -0.87
MACF1Q9UPN3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
MACF1Q9UPN3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
MACF1Q9UPN3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC9.6□□□□□ -0.87
MACF1Q9UPN3 RCN1P1-201ENST00000400413 996 ntBASIC9.6□□□□□ -0.87
MACF1Q9UPN3 ABHD17AP6-201ENST00000458502 1044 ntBASIC9.6□□□□□ -0.87
MACF1Q9UPN3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
MACF1Q9UPN3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC9.6□□□□□ -0.87
MACF1Q9UPN3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
MACF1Q9UPN3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC9.6□□□□□ -0.87
MACF1Q9UPN3 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
MACF1Q9UPN3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
MACF1Q9UPN3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
MACF1Q9UPN3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
MACF1Q9UPN3 RARRES2P4-201ENST00000514074 484 ntBASIC9.59□□□□□ -0.87
MACF1Q9UPN3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 AC083906.2-201ENST00000511578 360 ntBASIC9.59□□□□□ -0.87
MACF1Q9UPN3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 GXYLT1P3-201ENST00000453058 1193 ntBASIC9.59□□□□□ -0.87
MACF1Q9UPN3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
MACF1Q9UPN3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC9.58□□□□□ -0.88
MACF1Q9UPN3 AC128676.1-201ENST00000454392 318 ntBASIC9.58□□□□□ -0.88
MACF1Q9UPN3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC9.58□□□□□ -0.88
MACF1Q9UPN3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
MACF1Q9UPN3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
MACF1Q9UPN3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
MACF1Q9UPN3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
MACF1Q9UPN3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC9.58□□□□□ -0.88
MACF1Q9UPN3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
MACF1Q9UPN3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
MACF1Q9UPN3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
MACF1Q9UPN3 AC009102.2-201ENST00000606772 1639 ntBASIC9.58□□□□□ -0.88
MACF1Q9UPN3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC9.58□□□□□ -0.88
MACF1Q9UPN3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
MACF1Q9UPN3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
MACF1Q9UPN3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC9.58□□□□□ -0.88
MACF1Q9UPN3 AC004854.2-201ENST00000608450 1441 ntBASIC9.58□□□□□ -0.88
MACF1Q9UPN3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
MACF1Q9UPN3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
MACF1Q9UPN3 MME-217ENST00000616757 1315 ntTSL 5 BASIC9.58□□□□□ -0.88
MACF1Q9UPN3 FP325331.1-202ENST00000623531 1380 ntBASIC9.58□□□□□ -0.88
MACF1Q9UPN3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 UNC93B5-201ENST00000530315 699 ntBASIC9.57□□□□□ -0.88
MACF1Q9UPN3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 MIR3181-201ENST00000578512 73 ntBASIC9.57□□□□□ -0.88
MACF1Q9UPN3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 AL121832.2-201ENST00000610979 668 ntBASIC9.57□□□□□ -0.88
MACF1Q9UPN3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 ARMC10P1-201ENST00000313754 855 ntBASIC9.57□□□□□ -0.88
MACF1Q9UPN3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
MACF1Q9UPN3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms