Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 AL117328.2-201ENST00000624617 1940 ntBASIC18.98■□□□□ 0.63
Q9N2K0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9N2K0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Q9N2K0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Q9N2K0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Q9N2K0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Q9N2K0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Q9N2K0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q9N2K0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q9N2K0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Q9N2K0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Q9N2K0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q9N2K0 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.97■□□□□ 0.63
Q9N2K0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.97■□□□□ 0.63
Q9N2K0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.97■□□□□ 0.63
Q9N2K0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q9N2K0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Q9N2K0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.96■□□□□ 0.63
Q9N2K0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q9N2K0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Q9N2K0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.96■□□□□ 0.63
Q9N2K0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.96■□□□□ 0.63
Q9N2K0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q9N2K0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Q9N2K0 AC233723.2-201ENST00000623798 2106 ntBASIC18.95■□□□□ 0.62
Q9N2K0 AC139795.1-202ENST00000500444 432 ntBASIC18.95■□□□□ 0.62
Q9N2K0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q9N2K0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q9N2K0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Q9N2K0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q9N2K0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q9N2K0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q9N2K0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.95■□□□□ 0.62
Q9N2K0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q9N2K0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q9N2K0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q9N2K0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Q9N2K0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q9N2K0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q9N2K0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.94■□□□□ 0.62
Q9N2K0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Q9N2K0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q9N2K0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q9N2K0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Q9N2K0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q9N2K0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
Q9N2K0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q9N2K0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Q9N2K0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q9N2K0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q9N2K0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Q9N2K0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9N2K0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.93■□□□□ 0.62
Q9N2K0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9N2K0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9N2K0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9N2K0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9N2K0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Q9N2K0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9N2K0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9N2K0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.93■□□□□ 0.62
Q9N2K0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Q9N2K0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.93■□□□□ 0.62
Q9N2K0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Q9N2K0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9N2K0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q9N2K0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9N2K0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Q9N2K0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Q9N2K0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9N2K0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Q9N2K0 C1orf229-201ENST00000623686 2258 ntBASIC18.92■□□□□ 0.62
Q9N2K0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9N2K0 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.92■□□□□ 0.62
Q9N2K0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Q9N2K0 DUX4L18-201ENST00000553347 1267 ntBASIC18.92■□□□□ 0.62
Q9N2K0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.92■□□□□ 0.62
Q9N2K0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9N2K0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9N2K0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9N2K0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q9N2K0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
Q9N2K0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q9N2K0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Q9N2K0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.91■□□□□ 0.62
Q9N2K0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.91■□□□□ 0.62
Q9N2K0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q9N2K0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q9N2K0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Q9N2K0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Q9N2K0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Q9N2K0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Q9N2K0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q9N2K0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q9N2K0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q9N2K0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q9N2K0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.9■□□□□ 0.62
Q9N2K0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q9N2K0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Q9N2K0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms