Protein–RNA interactions for Protein: Q9H467

CUEDC2, CUE domain-containing protein 2, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2Q9H467 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.36■■□□□ 1.65
CUEDC2Q9H467 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CUEDC2Q9H467 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
CUEDC2Q9H467 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CUEDC2Q9H467 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CUEDC2Q9H467 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.36■■□□□ 1.65
CUEDC2Q9H467 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CUEDC2Q9H467 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CUEDC2Q9H467 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.35■■□□□ 1.65
CUEDC2Q9H467 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.35■■□□□ 1.65
CUEDC2Q9H467 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CUEDC2Q9H467 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CUEDC2Q9H467 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
CUEDC2Q9H467 RARRES2P1-201ENST00000474487 481 ntBASIC25.35■■□□□ 1.65
CUEDC2Q9H467 Z92544.1-202ENST00000571933 1220 ntBASIC25.35■■□□□ 1.65
CUEDC2Q9H467 MIR6722-201ENST00000617286 78 ntBASIC25.35■■□□□ 1.65
CUEDC2Q9H467 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.35■■□□□ 1.65
CUEDC2Q9H467 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CUEDC2Q9H467 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CUEDC2Q9H467 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC25.35■■□□□ 1.65
CUEDC2Q9H467 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CUEDC2Q9H467 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CUEDC2Q9H467 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.35■■□□□ 1.65
CUEDC2Q9H467 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CUEDC2Q9H467 DUSP8P3-201ENST00000399571 1760 ntBASIC25.34■■□□□ 1.65
CUEDC2Q9H467 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.34■■□□□ 1.65
CUEDC2Q9H467 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CUEDC2Q9H467 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.34■■□□□ 1.65
CUEDC2Q9H467 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
CUEDC2Q9H467 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.34■■□□□ 1.65
CUEDC2Q9H467 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
CUEDC2Q9H467 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CUEDC2Q9H467 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CUEDC2Q9H467 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.33■■□□□ 1.65
CUEDC2Q9H467 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.33■■□□□ 1.65
CUEDC2Q9H467 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.33■■□□□ 1.65
CUEDC2Q9H467 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CUEDC2Q9H467 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
CUEDC2Q9H467 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CUEDC2Q9H467 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.33■■□□□ 1.65
CUEDC2Q9H467 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CUEDC2Q9H467 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CUEDC2Q9H467 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
CUEDC2Q9H467 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC25.33■■□□□ 1.64
CUEDC2Q9H467 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.32■■□□□ 1.64
CUEDC2Q9H467 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CUEDC2Q9H467 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
CUEDC2Q9H467 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.32■■□□□ 1.64
CUEDC2Q9H467 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CUEDC2Q9H467 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
CUEDC2Q9H467 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
CUEDC2Q9H467 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.32■■□□□ 1.64
CUEDC2Q9H467 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CUEDC2Q9H467 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
CUEDC2Q9H467 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CUEDC2Q9H467 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CUEDC2Q9H467 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CUEDC2Q9H467 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CUEDC2Q9H467 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CUEDC2Q9H467 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.31■■□□□ 1.64
CUEDC2Q9H467 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CUEDC2Q9H467 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
CUEDC2Q9H467 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.31■■□□□ 1.64
CUEDC2Q9H467 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.31■■□□□ 1.64
CUEDC2Q9H467 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.31■■□□□ 1.64
CUEDC2Q9H467 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CUEDC2Q9H467 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.31■■□□□ 1.64
CUEDC2Q9H467 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CUEDC2Q9H467 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CUEDC2Q9H467 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CUEDC2Q9H467 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.3■■□□□ 1.64
CUEDC2Q9H467 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CUEDC2Q9H467 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CUEDC2Q9H467 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CUEDC2Q9H467 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.3■■□□□ 1.64
CUEDC2Q9H467 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.3■■□□□ 1.64
CUEDC2Q9H467 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.3■■□□□ 1.64
CUEDC2Q9H467 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.3■■□□□ 1.64
CUEDC2Q9H467 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CUEDC2Q9H467 AC012676.1-201ENST00000574705 1949 ntBASIC25.29■■□□□ 1.64
CUEDC2Q9H467 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CUEDC2Q9H467 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CUEDC2Q9H467 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CUEDC2Q9H467 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
CUEDC2Q9H467 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.29■■□□□ 1.64
CUEDC2Q9H467 AC068473.5-201ENST00000616428 2072 ntBASIC25.28■■□□□ 1.64
CUEDC2Q9H467 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CUEDC2Q9H467 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CUEDC2Q9H467 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
CUEDC2Q9H467 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CUEDC2Q9H467 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CUEDC2Q9H467 KRT125P-201ENST00000546827 989 ntBASIC25.28■■□□□ 1.64
CUEDC2Q9H467 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
CUEDC2Q9H467 AC092028.1-203ENST00000608262 953 ntBASIC25.28■■□□□ 1.64
CUEDC2Q9H467 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CUEDC2Q9H467 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.28■■□□□ 1.64
CUEDC2Q9H467 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
CUEDC2Q9H467 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.28■■□□□ 1.64
CUEDC2Q9H467 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
CUEDC2Q9H467 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms