Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NECTIN4Q96NY8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NECTIN4Q96NY8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
NECTIN4Q96NY8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.71■■□□□ 1.39
NECTIN4Q96NY8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.71■■□□□ 1.39
NECTIN4Q96NY8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NECTIN4Q96NY8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NECTIN4Q96NY8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
NECTIN4Q96NY8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.39
NECTIN4Q96NY8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
NECTIN4Q96NY8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.7■■□□□ 1.39
NECTIN4Q96NY8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.7■■□□□ 1.38
NECTIN4Q96NY8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
NECTIN4Q96NY8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
NECTIN4Q96NY8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.7■■□□□ 1.38
NECTIN4Q96NY8 AC004911.1-201ENST00000416316 871 ntBASIC23.7■■□□□ 1.38
NECTIN4Q96NY8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
NECTIN4Q96NY8 AL354811.1-201ENST00000610286 706 ntBASIC23.7■■□□□ 1.38
NECTIN4Q96NY8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NECTIN4Q96NY8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.7■■□□□ 1.38
NECTIN4Q96NY8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NECTIN4Q96NY8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
NECTIN4Q96NY8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NECTIN4Q96NY8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NECTIN4Q96NY8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
NECTIN4Q96NY8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
NECTIN4Q96NY8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
NECTIN4Q96NY8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.69■■□□□ 1.38
NECTIN4Q96NY8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.69■■□□□ 1.38
NECTIN4Q96NY8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.69■■□□□ 1.38
NECTIN4Q96NY8 MIR572-201ENST00000384983 95 ntBASIC23.69■■□□□ 1.38
NECTIN4Q96NY8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.69■■□□□ 1.38
NECTIN4Q96NY8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.69■■□□□ 1.38
NECTIN4Q96NY8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.69■■□□□ 1.38
NECTIN4Q96NY8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NECTIN4Q96NY8 IGHV3-19-201ENST00000521488 291 ntBASIC23.69■■□□□ 1.38
NECTIN4Q96NY8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.69■■□□□ 1.38
NECTIN4Q96NY8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.69■■□□□ 1.38
NECTIN4Q96NY8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
NECTIN4Q96NY8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.69■■□□□ 1.38
NECTIN4Q96NY8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
NECTIN4Q96NY8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
NECTIN4Q96NY8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NECTIN4Q96NY8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NECTIN4Q96NY8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
NECTIN4Q96NY8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NECTIN4Q96NY8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NECTIN4Q96NY8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.68■■□□□ 1.38
NECTIN4Q96NY8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
NECTIN4Q96NY8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NECTIN4Q96NY8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NECTIN4Q96NY8 AL161729.1-201ENST00000604104 1402 ntBASIC23.67■■□□□ 1.38
NECTIN4Q96NY8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NECTIN4Q96NY8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NECTIN4Q96NY8 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.67■■□□□ 1.38
NECTIN4Q96NY8 AC012414.1-201ENST00000556676 535 ntBASIC23.67■■□□□ 1.38
NECTIN4Q96NY8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.67■■□□□ 1.38
NECTIN4Q96NY8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NECTIN4Q96NY8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.67■■□□□ 1.38
NECTIN4Q96NY8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
NECTIN4Q96NY8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
NECTIN4Q96NY8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.66■■□□□ 1.38
NECTIN4Q96NY8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.66■■□□□ 1.38
NECTIN4Q96NY8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.66■■□□□ 1.38
NECTIN4Q96NY8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.66■■□□□ 1.38
NECTIN4Q96NY8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.66■■□□□ 1.38
NECTIN4Q96NY8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
NECTIN4Q96NY8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NECTIN4Q96NY8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.66■■□□□ 1.38
NECTIN4Q96NY8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
NECTIN4Q96NY8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.65■■□□□ 1.38
NECTIN4Q96NY8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NECTIN4Q96NY8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
NECTIN4Q96NY8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.65■■□□□ 1.38
NECTIN4Q96NY8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.65■■□□□ 1.38
NECTIN4Q96NY8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NECTIN4Q96NY8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NECTIN4Q96NY8 AC141586.4-201ENST00000624558 1573 ntBASIC23.65■■□□□ 1.38
NECTIN4Q96NY8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NECTIN4Q96NY8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
NECTIN4Q96NY8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NECTIN4Q96NY8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
NECTIN4Q96NY8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
NECTIN4Q96NY8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NECTIN4Q96NY8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.64■■□□□ 1.37
NECTIN4Q96NY8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.64■■□□□ 1.37
NECTIN4Q96NY8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NECTIN4Q96NY8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NECTIN4Q96NY8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NECTIN4Q96NY8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NECTIN4Q96NY8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.63■■□□□ 1.37
NECTIN4Q96NY8 CCDC92B-201ENST00000575506 885 ntBASIC23.63■■□□□ 1.37
NECTIN4Q96NY8 SLC6A10P-202ENST00000431994 2058 ntBASIC23.63■■□□□ 1.37
NECTIN4Q96NY8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
NECTIN4Q96NY8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
NECTIN4Q96NY8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.62■■□□□ 1.37
NECTIN4Q96NY8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
NECTIN4Q96NY8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
NECTIN4Q96NY8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.62■■□□□ 1.37
NECTIN4Q96NY8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms