Protein–RNA interactions for Protein: Q96NL6

SCLT1, Sodium channel and clathrin linker 1, humanhuman

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1Q96NL6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC25.17■■□□□ 1.62
SCLT1Q96NL6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
SCLT1Q96NL6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.16■■□□□ 1.62
SCLT1Q96NL6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
SCLT1Q96NL6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.16■■□□□ 1.62
SCLT1Q96NL6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.16■■□□□ 1.62
SCLT1Q96NL6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SCLT1Q96NL6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
SCLT1Q96NL6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCLT1Q96NL6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SCLT1Q96NL6 AL161729.1-201ENST00000604104 1402 ntBASIC25.15■■□□□ 1.62
SCLT1Q96NL6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.15■■□□□ 1.62
SCLT1Q96NL6 UNC93B3-201ENST00000308076 687 ntBASIC25.15■■□□□ 1.62
SCLT1Q96NL6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.15■■□□□ 1.62
SCLT1Q96NL6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.15■■□□□ 1.62
SCLT1Q96NL6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
SCLT1Q96NL6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.15■■□□□ 1.62
SCLT1Q96NL6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCLT1Q96NL6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCLT1Q96NL6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SCLT1Q96NL6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
SCLT1Q96NL6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.14■■□□□ 1.62
SCLT1Q96NL6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
SCLT1Q96NL6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SCLT1Q96NL6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SCLT1Q96NL6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SCLT1Q96NL6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SCLT1Q96NL6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SCLT1Q96NL6 AL136162.1-201ENST00000607711 1078 ntBASIC25.14■■□□□ 1.62
SCLT1Q96NL6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SCLT1Q96NL6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.14■■□□□ 1.61
SCLT1Q96NL6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SCLT1Q96NL6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCLT1Q96NL6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SCLT1Q96NL6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.13■■□□□ 1.61
SCLT1Q96NL6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.13■■□□□ 1.61
SCLT1Q96NL6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SCLT1Q96NL6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.13■■□□□ 1.61
SCLT1Q96NL6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.13■■□□□ 1.61
SCLT1Q96NL6 AC005837.3-201ENST00000612163 286 ntBASIC25.13■■□□□ 1.61
SCLT1Q96NL6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
SCLT1Q96NL6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCLT1Q96NL6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
SCLT1Q96NL6 AC093323.1-202ENST00000635031 2045 ntBASIC25.12■■□□□ 1.61
SCLT1Q96NL6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.12■■□□□ 1.61
SCLT1Q96NL6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SCLT1Q96NL6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SCLT1Q96NL6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
SCLT1Q96NL6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
SCLT1Q96NL6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
SCLT1Q96NL6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SCLT1Q96NL6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.11■■□□□ 1.61
SCLT1Q96NL6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SCLT1Q96NL6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCLT1Q96NL6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.11■■□□□ 1.61
SCLT1Q96NL6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SCLT1Q96NL6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.11■■□□□ 1.61
SCLT1Q96NL6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCLT1Q96NL6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
SCLT1Q96NL6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
SCLT1Q96NL6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.1■■□□□ 1.61
SCLT1Q96NL6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCLT1Q96NL6 AC142381.3-201ENST00000568208 1670 ntBASIC25.1■■□□□ 1.61
SCLT1Q96NL6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCLT1Q96NL6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SCLT1Q96NL6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCLT1Q96NL6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCLT1Q96NL6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCLT1Q96NL6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.1■■□□□ 1.61
SCLT1Q96NL6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SCLT1Q96NL6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.1■■□□□ 1.61
SCLT1Q96NL6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
SCLT1Q96NL6 AC106739.1-201ENST00000617035 715 ntBASIC25.1■■□□□ 1.61
SCLT1Q96NL6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SCLT1Q96NL6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SCLT1Q96NL6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SCLT1Q96NL6 AC138932.3-201ENST00000567634 1902 ntBASIC25.1■■□□□ 1.61
SCLT1Q96NL6 AC135279.3-201ENST00000610945 1311 ntBASIC25.1■■□□□ 1.61
SCLT1Q96NL6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCLT1Q96NL6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.09■■□□□ 1.61
SCLT1Q96NL6 AC009102.2-201ENST00000606772 1639 ntBASIC25.09■■□□□ 1.61
SCLT1Q96NL6 AC092171.4-201ENST00000609130 632 ntBASIC25.09■■□□□ 1.61
SCLT1Q96NL6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCLT1Q96NL6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.09■■□□□ 1.61
SCLT1Q96NL6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.09■■□□□ 1.61
SCLT1Q96NL6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.08■■□□□ 1.61
SCLT1Q96NL6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
SCLT1Q96NL6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.08■■□□□ 1.61
SCLT1Q96NL6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
SCLT1Q96NL6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
SCLT1Q96NL6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SCLT1Q96NL6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SCLT1Q96NL6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
SCLT1Q96NL6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.07■■□□□ 1.6
SCLT1Q96NL6 MIR935-201ENST00000401179 91 ntBASIC25.07■■□□□ 1.6
SCLT1Q96NL6 DUX4L19-201ENST00000557448 1267 ntBASIC25.07■■□□□ 1.6
SCLT1Q96NL6 AC133561.4-201ENST00000566112 224 ntBASIC25.07■■□□□ 1.6
SCLT1Q96NL6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.07■■□□□ 1.6
SCLT1Q96NL6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SCLT1Q96NL6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms