Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPNE4Q96A23 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE4Q96A23 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE4Q96A23 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE4Q96A23 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE4Q96A23 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE4Q96A23 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE4Q96A23 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPNE4Q96A23 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.33■□□□□ 0.85
CPNE4Q96A23 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.33■□□□□ 0.85
CPNE4Q96A23 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.33■□□□□ 0.85
CPNE4Q96A23 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPNE4Q96A23 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CPNE4Q96A23 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE4Q96A23 AC004812.2-201ENST00000611079 2094 ntBASIC20.32■□□□□ 0.84
CPNE4Q96A23 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE4Q96A23 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE4Q96A23 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CPNE4Q96A23 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.32■□□□□ 0.84
CPNE4Q96A23 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE4Q96A23 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE4Q96A23 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE4Q96A23 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPNE4Q96A23 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
CPNE4Q96A23 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE4Q96A23 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE4Q96A23 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE4Q96A23 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE4Q96A23 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CPNE4Q96A23 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.31■□□□□ 0.84
CPNE4Q96A23 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE4Q96A23 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE4Q96A23 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE4Q96A23 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE4Q96A23 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.31■□□□□ 0.84
CPNE4Q96A23 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.31■□□□□ 0.84
CPNE4Q96A23 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.31■□□□□ 0.84
CPNE4Q96A23 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE4Q96A23 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE4Q96A23 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.31■□□□□ 0.84
CPNE4Q96A23 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.31■□□□□ 0.84
CPNE4Q96A23 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE4Q96A23 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE4Q96A23 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE4Q96A23 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CPNE4Q96A23 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE4Q96A23 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.3■□□□□ 0.84
CPNE4Q96A23 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.3■□□□□ 0.84
CPNE4Q96A23 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE4Q96A23 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE4Q96A23 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE4Q96A23 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.3■□□□□ 0.84
CPNE4Q96A23 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.3■□□□□ 0.84
CPNE4Q96A23 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE4Q96A23 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CPNE4Q96A23 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE4Q96A23 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE4Q96A23 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CPNE4Q96A23 AC008406.3-201ENST00000620001 1374 ntBASIC20.3■□□□□ 0.84
CPNE4Q96A23 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
CPNE4Q96A23 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE4Q96A23 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE4Q96A23 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE4Q96A23 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE4Q96A23 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE4Q96A23 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE4Q96A23 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE4Q96A23 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.29■□□□□ 0.84
CPNE4Q96A23 AC131281.2-201ENST00000520478 145 ntBASIC20.29■□□□□ 0.84
CPNE4Q96A23 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE4Q96A23 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE4Q96A23 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE4Q96A23 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.28■□□□□ 0.84
CPNE4Q96A23 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CPNE4Q96A23 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE4Q96A23 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE4Q96A23 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE4Q96A23 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE4Q96A23 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CPNE4Q96A23 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE4Q96A23 AL512631.2-201ENST00000604634 923 ntBASIC20.27■□□□□ 0.84
CPNE4Q96A23 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE4Q96A23 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CPNE4Q96A23 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CPNE4Q96A23 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.27■□□□□ 0.83
CPNE4Q96A23 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.27■□□□□ 0.83
CPNE4Q96A23 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.27■□□□□ 0.83
CPNE4Q96A23 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE4Q96A23 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE4Q96A23 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CPNE4Q96A23 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE4Q96A23 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE4Q96A23 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE4Q96A23 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE4Q96A23 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE4Q96A23 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE4Q96A23 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE4Q96A23 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE4Q96A23 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE4Q96A23 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 271.1 ms