Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SNIP1Q8TAD8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNIP1Q8TAD8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNIP1Q8TAD8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNIP1Q8TAD8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.47■■□□□ 1.03
SNIP1Q8TAD8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNIP1Q8TAD8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNIP1Q8TAD8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNIP1Q8TAD8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.47■■□□□ 1.03
SNIP1Q8TAD8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SNIP1Q8TAD8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNIP1Q8TAD8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SNIP1Q8TAD8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SNIP1Q8TAD8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.46■■□□□ 1.03
SNIP1Q8TAD8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.46■■□□□ 1.03
SNIP1Q8TAD8 CCDC92B-201ENST00000575506 885 ntBASIC21.46■■□□□ 1.03
SNIP1Q8TAD8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.46■■□□□ 1.03
SNIP1Q8TAD8 NTF6G-201ENST00000591094 616 ntBASIC21.46■■□□□ 1.03
SNIP1Q8TAD8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.46■■□□□ 1.03
SNIP1Q8TAD8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNIP1Q8TAD8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SNIP1Q8TAD8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNIP1Q8TAD8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SNIP1Q8TAD8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.45■■□□□ 1.02
SNIP1Q8TAD8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SNIP1Q8TAD8 AC012414.1-201ENST00000556676 535 ntBASIC21.45■■□□□ 1.02
SNIP1Q8TAD8 AL354811.1-201ENST00000610286 706 ntBASIC21.45■■□□□ 1.02
SNIP1Q8TAD8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SNIP1Q8TAD8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.45■■□□□ 1.02
SNIP1Q8TAD8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.45■■□□□ 1.02
SNIP1Q8TAD8 AC096887.2-201ENST00000623443 1957 ntBASIC21.45■■□□□ 1.02
SNIP1Q8TAD8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.44■■□□□ 1.02
SNIP1Q8TAD8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNIP1Q8TAD8 MIR572-201ENST00000384983 95 ntBASIC21.44■■□□□ 1.02
SNIP1Q8TAD8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.44■■□□□ 1.02
SNIP1Q8TAD8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.44■■□□□ 1.02
SNIP1Q8TAD8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNIP1Q8TAD8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SNIP1Q8TAD8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
SNIP1Q8TAD8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.44■■□□□ 1.02
SNIP1Q8TAD8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNIP1Q8TAD8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.43■■□□□ 1.02
SNIP1Q8TAD8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNIP1Q8TAD8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNIP1Q8TAD8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.43■■□□□ 1.02
SNIP1Q8TAD8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SNIP1Q8TAD8 IGHV3-19-201ENST00000521488 291 ntBASIC21.43■■□□□ 1.02
SNIP1Q8TAD8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.43■■□□□ 1.02
SNIP1Q8TAD8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.43■■□□□ 1.02
SNIP1Q8TAD8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNIP1Q8TAD8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.43■■□□□ 1.02
SNIP1Q8TAD8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNIP1Q8TAD8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNIP1Q8TAD8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNIP1Q8TAD8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.42■■□□□ 1.02
SNIP1Q8TAD8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SNIP1Q8TAD8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.42■■□□□ 1.02
SNIP1Q8TAD8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNIP1Q8TAD8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNIP1Q8TAD8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SNIP1Q8TAD8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNIP1Q8TAD8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SNIP1Q8TAD8 MIR6084-201ENST00000622012 110 ntBASIC21.42■■□□□ 1.02
SNIP1Q8TAD8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNIP1Q8TAD8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SNIP1Q8TAD8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNIP1Q8TAD8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.41■■□□□ 1.02
SNIP1Q8TAD8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.41■■□□□ 1.02
SNIP1Q8TAD8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.41■■□□□ 1.02
SNIP1Q8TAD8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SNIP1Q8TAD8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SNIP1Q8TAD8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNIP1Q8TAD8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNIP1Q8TAD8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SNIP1Q8TAD8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.4■■□□□ 1.02
SNIP1Q8TAD8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.4■■□□□ 1.02
SNIP1Q8TAD8 KRT18P14-201ENST00000534205 1250 ntBASIC21.4■■□□□ 1.02
SNIP1Q8TAD8 pRNA.6-201ENST00000610482 90 ntBASIC21.4■■□□□ 1.02
SNIP1Q8TAD8 pRNA.5-201ENST00000612139 90 ntBASIC21.4■■□□□ 1.02
SNIP1Q8TAD8 pRNA.11-201ENST00000618423 90 ntBASIC21.4■■□□□ 1.02
SNIP1Q8TAD8 pRNA.13-201ENST00000619112 90 ntBASIC21.4■■□□□ 1.02
SNIP1Q8TAD8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.4■■□□□ 1.02
SNIP1Q8TAD8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SNIP1Q8TAD8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SNIP1Q8TAD8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.39■■□□□ 1.01
SNIP1Q8TAD8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
SNIP1Q8TAD8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.39■■□□□ 1.01
SNIP1Q8TAD8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.39■■□□□ 1.01
SNIP1Q8TAD8 TERF1P2-201ENST00000583350 1212 ntBASIC21.39■■□□□ 1.01
SNIP1Q8TAD8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
SNIP1Q8TAD8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.39■■□□□ 1.01
SNIP1Q8TAD8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SNIP1Q8TAD8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
SNIP1Q8TAD8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SNIP1Q8TAD8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SNIP1Q8TAD8 AL022069.1-201ENST00000568025 1636 ntBASIC21.38■■□□□ 1.01
SNIP1Q8TAD8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.38■■□□□ 1.01
SNIP1Q8TAD8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.38■■□□□ 1.01
SNIP1Q8TAD8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.38■■□□□ 1.01
SNIP1Q8TAD8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms