Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PAF1Q8N7H5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC23.16■■□□□ 1.3
PAF1Q8N7H5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PAF1Q8N7H5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.16■■□□□ 1.3
PAF1Q8N7H5 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PAF1Q8N7H5 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.16■■□□□ 1.3
PAF1Q8N7H5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PAF1Q8N7H5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PAF1Q8N7H5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PAF1Q8N7H5 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.16■■□□□ 1.3
PAF1Q8N7H5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.16■■□□□ 1.3
PAF1Q8N7H5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PAF1Q8N7H5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.16■■□□□ 1.3
PAF1Q8N7H5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.16■■□□□ 1.3
PAF1Q8N7H5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PAF1Q8N7H5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PAF1Q8N7H5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.16■■□□□ 1.3
PAF1Q8N7H5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PAF1Q8N7H5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PAF1Q8N7H5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
PAF1Q8N7H5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PAF1Q8N7H5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.15■■□□□ 1.3
PAF1Q8N7H5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PAF1Q8N7H5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PAF1Q8N7H5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.15■■□□□ 1.3
PAF1Q8N7H5 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PAF1Q8N7H5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.15■■□□□ 1.3
PAF1Q8N7H5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PAF1Q8N7H5 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.14■■□□□ 1.3
PAF1Q8N7H5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC23.14■■□□□ 1.3
PAF1Q8N7H5 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.14■■□□□ 1.29
PAF1Q8N7H5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PAF1Q8N7H5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PAF1Q8N7H5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.14■■□□□ 1.29
PAF1Q8N7H5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PAF1Q8N7H5 AL161729.1-201ENST00000604104 1402 ntBASIC23.14■■□□□ 1.29
PAF1Q8N7H5 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PAF1Q8N7H5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
PAF1Q8N7H5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
PAF1Q8N7H5 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
PAF1Q8N7H5 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PAF1Q8N7H5 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.13■■□□□ 1.29
PAF1Q8N7H5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
PAF1Q8N7H5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.13■■□□□ 1.29
PAF1Q8N7H5 MIR6724-1-201ENST00000616420 92 ntBASIC23.13■■□□□ 1.29
PAF1Q8N7H5 MIR6724-2-201ENST00000616483 92 ntBASIC23.13■■□□□ 1.29
PAF1Q8N7H5 MIR6724-4-201ENST00000617390 92 ntBASIC23.13■■□□□ 1.29
PAF1Q8N7H5 MIR6724-3-201ENST00000622482 92 ntBASIC23.13■■□□□ 1.29
PAF1Q8N7H5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PAF1Q8N7H5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
PAF1Q8N7H5 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PAF1Q8N7H5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PAF1Q8N7H5 AL139125.2-201ENST00000623134 1869 ntBASIC23.13■■□□□ 1.29
PAF1Q8N7H5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
PAF1Q8N7H5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PAF1Q8N7H5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PAF1Q8N7H5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.12■■□□□ 1.29
PAF1Q8N7H5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
PAF1Q8N7H5 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.12■■□□□ 1.29
PAF1Q8N7H5 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.12■■□□□ 1.29
PAF1Q8N7H5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PAF1Q8N7H5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
PAF1Q8N7H5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PAF1Q8N7H5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.11■■□□□ 1.29
PAF1Q8N7H5 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
PAF1Q8N7H5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.11■■□□□ 1.29
PAF1Q8N7H5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PAF1Q8N7H5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PAF1Q8N7H5 MIR6722-201ENST00000617286 78 ntBASIC23.11■■□□□ 1.29
PAF1Q8N7H5 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PAF1Q8N7H5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PAF1Q8N7H5 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PAF1Q8N7H5 AC005703.6-201ENST00000623265 1329 ntBASIC23.1■■□□□ 1.29
PAF1Q8N7H5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.1■■□□□ 1.29
PAF1Q8N7H5 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.1■■□□□ 1.29
PAF1Q8N7H5 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PAF1Q8N7H5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.1■■□□□ 1.29
PAF1Q8N7H5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PAF1Q8N7H5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.1■■□□□ 1.29
PAF1Q8N7H5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.09■■□□□ 1.29
PAF1Q8N7H5 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.09■■□□□ 1.29
PAF1Q8N7H5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PAF1Q8N7H5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.09■■□□□ 1.29
PAF1Q8N7H5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PAF1Q8N7H5 AL356740.2-201ENST00000601559 647 ntBASIC23.08■■□□□ 1.29
PAF1Q8N7H5 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.08■■□□□ 1.29
PAF1Q8N7H5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.28
PAF1Q8N7H5 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
PAF1Q8N7H5 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PAF1Q8N7H5 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.07■■□□□ 1.28
PAF1Q8N7H5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PAF1Q8N7H5 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PAF1Q8N7H5 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PAF1Q8N7H5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.07■■□□□ 1.28
PAF1Q8N7H5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.07■■□□□ 1.28
PAF1Q8N7H5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.07■■□□□ 1.28
PAF1Q8N7H5 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PAF1Q8N7H5 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PAF1Q8N7H5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PAF1Q8N7H5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms