Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
ABCA6Q8N139 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
ABCA6Q8N139 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
ABCA6Q8N139 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC34.25■■■■□ 3.07
ABCA6Q8N139 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC34.25■■■■□ 3.07
ABCA6Q8N139 HLA-L-209ENST00000420110 1011 ntBASIC34.25■■■■□ 3.07
ABCA6Q8N139 TERF1P2-201ENST00000583350 1212 ntBASIC34.25■■■■□ 3.07
ABCA6Q8N139 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
ABCA6Q8N139 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC34.25■■■■□ 3.07
ABCA6Q8N139 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC34.25■■■■□ 3.07
ABCA6Q8N139 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
ABCA6Q8N139 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC34.25■■■■□ 3.07
ABCA6Q8N139 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC34.24■■■■□ 3.07
ABCA6Q8N139 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
ABCA6Q8N139 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC34.24■■■■□ 3.07
ABCA6Q8N139 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
ABCA6Q8N139 MIR572-201ENST00000384983 95 ntBASIC34.24■■■■□ 3.07
ABCA6Q8N139 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
ABCA6Q8N139 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC34.24■■■■□ 3.07
ABCA6Q8N139 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC34.23■■■■□ 3.07
ABCA6Q8N139 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC34.23■■■■□ 3.07
ABCA6Q8N139 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
ABCA6Q8N139 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC34.23■■■■□ 3.07
ABCA6Q8N139 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC34.22■■■■□ 3.07
ABCA6Q8N139 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC34.22■■■■□ 3.07
ABCA6Q8N139 pRNA.6-201ENST00000610482 90 ntBASIC34.22■■■■□ 3.07
ABCA6Q8N139 pRNA.5-201ENST00000612139 90 ntBASIC34.22■■■■□ 3.07
ABCA6Q8N139 pRNA.11-201ENST00000618423 90 ntBASIC34.22■■■■□ 3.07
ABCA6Q8N139 pRNA.13-201ENST00000619112 90 ntBASIC34.22■■■■□ 3.07
ABCA6Q8N139 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
ABCA6Q8N139 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
ABCA6Q8N139 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC34.21■■■■□ 3.07
ABCA6Q8N139 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC34.2■■■■□ 3.07
ABCA6Q8N139 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC34.2■■■■□ 3.07
ABCA6Q8N139 KRT18P61-201ENST00000585825 1298 ntBASIC34.2■■■■□ 3.07
ABCA6Q8N139 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC34.2■■■■□ 3.07
ABCA6Q8N139 AL022069.1-201ENST00000568025 1636 ntBASIC34.2■■■■□ 3.07
ABCA6Q8N139 CD37-213ENST00000598095 1598 ntTSL 2 BASIC34.2■■■■□ 3.06
ABCA6Q8N139 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC34.2■■■■□ 3.06
ABCA6Q8N139 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
ABCA6Q8N139 AL354811.1-201ENST00000610286 706 ntBASIC34.19■■■■□ 3.06
ABCA6Q8N139 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC34.19■■■■□ 3.06
ABCA6Q8N139 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC34.19■■■■□ 3.06
ABCA6Q8N139 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC34.19■■■■□ 3.06
ABCA6Q8N139 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC34.18■■■■□ 3.06
ABCA6Q8N139 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC34.18■■■■□ 3.06
ABCA6Q8N139 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC34.18■■■■□ 3.06
ABCA6Q8N139 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC34.18■■■■□ 3.06
ABCA6Q8N139 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC34.17■■■■□ 3.06
ABCA6Q8N139 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC34.17■■■■□ 3.06
ABCA6Q8N139 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC34.17■■■■□ 3.06
ABCA6Q8N139 USF2-207ENST00000595068 1612 ntTSL 5 BASIC34.17■■■■□ 3.06
ABCA6Q8N139 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC34.17■■■■□ 3.06
ABCA6Q8N139 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
ABCA6Q8N139 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC34.16■■■■□ 3.06
ABCA6Q8N139 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC34.16■■■■□ 3.06
ABCA6Q8N139 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC34.16■■■■□ 3.06
ABCA6Q8N139 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
ABCA6Q8N139 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
ABCA6Q8N139 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC34.16■■■■□ 3.06
ABCA6Q8N139 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
ABCA6Q8N139 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC34.15■■■■□ 3.06
ABCA6Q8N139 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC34.15■■■■□ 3.06
ABCA6Q8N139 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC34.15■■■■□ 3.06
ABCA6Q8N139 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC34.15■■■■□ 3.06
ABCA6Q8N139 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC34.15■■■■□ 3.06
ABCA6Q8N139 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC34.15■■■■□ 3.06
ABCA6Q8N139 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC34.15■■■■□ 3.06
ABCA6Q8N139 RAP2CP1-201ENST00000605103 478 ntBASIC34.15■■■■□ 3.06
ABCA6Q8N139 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC34.15■■■■□ 3.06
ABCA6Q8N139 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
ABCA6Q8N139 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC34.14■■■■□ 3.06
ABCA6Q8N139 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC34.14■■■■□ 3.06
ABCA6Q8N139 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC34.13■■■■□ 3.05
ABCA6Q8N139 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC34.13■■■■□ 3.05
ABCA6Q8N139 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC34.13■■■■□ 3.05
ABCA6Q8N139 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
ABCA6Q8N139 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC34.13■■■■□ 3.05
ABCA6Q8N139 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
ABCA6Q8N139 PKM-203ENST00000389093 2279 ntTSL 5 BASIC34.13■■■■□ 3.05
ABCA6Q8N139 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC34.12■■■■□ 3.05
ABCA6Q8N139 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
ABCA6Q8N139 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC34.12■■■■□ 3.05
ABCA6Q8N139 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
ABCA6Q8N139 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
ABCA6Q8N139 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
ABCA6Q8N139 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC34.1■■■■□ 3.05
ABCA6Q8N139 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
ABCA6Q8N139 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC34.1■■■■□ 3.05
ABCA6Q8N139 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC34.09■■■■□ 3.05
ABCA6Q8N139 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
ABCA6Q8N139 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC34.08■■■■□ 3.05
ABCA6Q8N139 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC34.08■■■■□ 3.05
ABCA6Q8N139 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC34.08■■■■□ 3.05
ABCA6Q8N139 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
ABCA6Q8N139 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC34.08■■■■□ 3.05
ABCA6Q8N139 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
ABCA6Q8N139 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC34.08■■■■□ 3.05
ABCA6Q8N139 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
ABCA6Q8N139 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms