Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
SLX4Q8IY92 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
SLX4Q8IY92 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC28.14■■■□□ 2.1
SLX4Q8IY92 AC123595.1-201ENST00000440769 1046 ntBASIC28.14■■■□□ 2.1
SLX4Q8IY92 AC092803.2-201ENST00000564287 1899 ntBASIC28.14■■■□□ 2.1
SLX4Q8IY92 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
SLX4Q8IY92 ME3-201ENST00000323418 1068 ntTSL 5 BASIC28.13■■■□□ 2.09
SLX4Q8IY92 DLX3-202ENST00000512495 834 ntTSL 2 BASIC28.13■■■□□ 2.09
SLX4Q8IY92 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
SLX4Q8IY92 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
SLX4Q8IY92 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.13■■■□□ 2.09
SLX4Q8IY92 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.13■■■□□ 2.09
SLX4Q8IY92 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SLX4Q8IY92 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC28.13■■■□□ 2.09
SLX4Q8IY92 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SLX4Q8IY92 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC28.13■■■□□ 2.09
SLX4Q8IY92 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC28.13■■■□□ 2.09
SLX4Q8IY92 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC28.12■■■□□ 2.09
SLX4Q8IY92 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
SLX4Q8IY92 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
SLX4Q8IY92 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC28.12■■■□□ 2.09
SLX4Q8IY92 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
SLX4Q8IY92 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SLX4Q8IY92 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.12■■■□□ 2.09
SLX4Q8IY92 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SLX4Q8IY92 AL358852.1-201ENST00000623174 1268 ntBASIC28.12■■■□□ 2.09
SLX4Q8IY92 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
SLX4Q8IY92 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SLX4Q8IY92 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC28.12■■■□□ 2.09
SLX4Q8IY92 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SLX4Q8IY92 AICDA-202ENST00000537228 667 ntTSL 5 BASIC28.11■■■□□ 2.09
SLX4Q8IY92 CCDC92B-201ENST00000575506 885 ntBASIC28.11■■■□□ 2.09
SLX4Q8IY92 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC28.11■■■□□ 2.09
SLX4Q8IY92 MIR6084-201ENST00000622012 110 ntBASIC28.11■■■□□ 2.09
SLX4Q8IY92 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SLX4Q8IY92 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SLX4Q8IY92 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
SLX4Q8IY92 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
SLX4Q8IY92 MIR572-201ENST00000384983 95 ntBASIC28.1■■■□□ 2.09
SLX4Q8IY92 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC28.1■■■□□ 2.09
SLX4Q8IY92 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
SLX4Q8IY92 IGHV3-19-201ENST00000521488 291 ntBASIC28.09■■■□□ 2.09
SLX4Q8IY92 KRT18P14-201ENST00000534205 1250 ntBASIC28.09■■■□□ 2.09
SLX4Q8IY92 VPS53-216ENST00000574029 585 ntTSL 4 BASIC28.09■■■□□ 2.09
SLX4Q8IY92 pRNA.6-201ENST00000610482 90 ntBASIC28.09■■■□□ 2.09
SLX4Q8IY92 pRNA.5-201ENST00000612139 90 ntBASIC28.09■■■□□ 2.09
SLX4Q8IY92 pRNA.11-201ENST00000618423 90 ntBASIC28.09■■■□□ 2.09
SLX4Q8IY92 pRNA.13-201ENST00000619112 90 ntBASIC28.09■■■□□ 2.09
SLX4Q8IY92 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
SLX4Q8IY92 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC28.09■■■□□ 2.09
SLX4Q8IY92 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC28.09■■■□□ 2.09
SLX4Q8IY92 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
SLX4Q8IY92 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC28.08■■■□□ 2.09
SLX4Q8IY92 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
SLX4Q8IY92 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
SLX4Q8IY92 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC28.08■■■□□ 2.09
SLX4Q8IY92 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
SLX4Q8IY92 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
SLX4Q8IY92 CD37-213ENST00000598095 1598 ntTSL 2 BASIC28.08■■■□□ 2.09
SLX4Q8IY92 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SLX4Q8IY92 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
SLX4Q8IY92 NME4-202ENST00000382940 766 ntTSL 3 BASIC28.07■■■□□ 2.08
SLX4Q8IY92 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
SLX4Q8IY92 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC28.07■■■□□ 2.08
SLX4Q8IY92 NME4-211ENST00000620944 1193 ntTSL 2 BASIC28.07■■■□□ 2.08
SLX4Q8IY92 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SLX4Q8IY92 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
SLX4Q8IY92 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC28.07■■■□□ 2.08
SLX4Q8IY92 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC28.06■■■□□ 2.08
SLX4Q8IY92 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
SLX4Q8IY92 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.06■■■□□ 2.08
SLX4Q8IY92 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
SLX4Q8IY92 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SLX4Q8IY92 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
SLX4Q8IY92 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC28.06■■■□□ 2.08
SLX4Q8IY92 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SLX4Q8IY92 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SLX4Q8IY92 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC28.05■■■□□ 2.08
SLX4Q8IY92 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
SLX4Q8IY92 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SLX4Q8IY92 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
SLX4Q8IY92 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SLX4Q8IY92 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SLX4Q8IY92 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
SLX4Q8IY92 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC28.04■■■□□ 2.08
SLX4Q8IY92 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SLX4Q8IY92 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
SLX4Q8IY92 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC28.04■■■□□ 2.08
SLX4Q8IY92 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SLX4Q8IY92 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
SLX4Q8IY92 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SLX4Q8IY92 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SLX4Q8IY92 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC28.02■■■□□ 2.08
SLX4Q8IY92 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC28.02■■■□□ 2.08
SLX4Q8IY92 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC28.02■■■□□ 2.08
SLX4Q8IY92 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC28.02■■■□□ 2.08
SLX4Q8IY92 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.02■■■□□ 2.08
SLX4Q8IY92 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SLX4Q8IY92 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC28.02■■■□□ 2.08
SLX4Q8IY92 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC28.02■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms