Protein–RNA interactions for Protein: Q86XW9

NME9, Thioredoxin domain-containing protein 6, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME9Q86XW9 ALDH1A3-203ENST00000557963 1670 ntBASIC30.95■■■□□ 2.55
NME9Q86XW9 AC027682.1-201ENST00000562846 899 ntBASIC30.95■■■□□ 2.55
NME9Q86XW9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC30.95■■■□□ 2.55
NME9Q86XW9 AC009086.3-201ENST00000623486 1008 ntBASIC30.95■■■□□ 2.55
NME9Q86XW9 AC136469.2-201ENST00000623944 1028 ntBASIC30.95■■■□□ 2.55
NME9Q86XW9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC30.95■■■□□ 2.54
NME9Q86XW9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
NME9Q86XW9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
NME9Q86XW9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
NME9Q86XW9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC30.94■■■□□ 2.54
NME9Q86XW9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
NME9Q86XW9 AC099791.1-201ENST00000416440 715 ntBASIC30.94■■■□□ 2.54
NME9Q86XW9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC30.94■■■□□ 2.54
NME9Q86XW9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC30.94■■■□□ 2.54
NME9Q86XW9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
NME9Q86XW9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
NME9Q86XW9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
NME9Q86XW9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
NME9Q86XW9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC30.93■■■□□ 2.54
NME9Q86XW9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC30.93■■■□□ 2.54
NME9Q86XW9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
NME9Q86XW9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
NME9Q86XW9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
NME9Q86XW9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC30.92■■■□□ 2.54
NME9Q86XW9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC30.92■■■□□ 2.54
NME9Q86XW9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC30.92■■■□□ 2.54
NME9Q86XW9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC30.92■■■□□ 2.54
NME9Q86XW9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC30.92■■■□□ 2.54
NME9Q86XW9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC30.92■■■□□ 2.54
NME9Q86XW9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC30.92■■■□□ 2.54
NME9Q86XW9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
NME9Q86XW9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
NME9Q86XW9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
NME9Q86XW9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
NME9Q86XW9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
NME9Q86XW9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
NME9Q86XW9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC30.9■■■□□ 2.54
NME9Q86XW9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
NME9Q86XW9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC30.9■■■□□ 2.54
NME9Q86XW9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
NME9Q86XW9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC30.9■■■□□ 2.54
NME9Q86XW9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC30.9■■■□□ 2.54
NME9Q86XW9 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
NME9Q86XW9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC30.9■■■□□ 2.54
NME9Q86XW9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
NME9Q86XW9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
NME9Q86XW9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
NME9Q86XW9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
NME9Q86XW9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC30.89■■■□□ 2.54
NME9Q86XW9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
NME9Q86XW9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC30.88■■■□□ 2.53
NME9Q86XW9 AC092666.2-201ENST00000613287 246 ntBASIC30.88■■■□□ 2.53
NME9Q86XW9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
NME9Q86XW9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC30.88■■■□□ 2.53
NME9Q86XW9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC30.88■■■□□ 2.53
NME9Q86XW9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
NME9Q86XW9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
NME9Q86XW9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
NME9Q86XW9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC30.87■■■□□ 2.53
NME9Q86XW9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC30.87■■■□□ 2.53
NME9Q86XW9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
NME9Q86XW9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
NME9Q86XW9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
NME9Q86XW9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC30.87■■■□□ 2.53
NME9Q86XW9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
NME9Q86XW9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC30.86■■■□□ 2.53
NME9Q86XW9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC30.86■■■□□ 2.53
NME9Q86XW9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC30.86■■■□□ 2.53
NME9Q86XW9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
NME9Q86XW9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC30.85■■■□□ 2.53
NME9Q86XW9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
NME9Q86XW9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
NME9Q86XW9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
NME9Q86XW9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC30.85■■■□□ 2.53
NME9Q86XW9 MIR5787-201ENST00000611784 55 ntBASIC30.85■■■□□ 2.53
NME9Q86XW9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
NME9Q86XW9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
NME9Q86XW9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
NME9Q86XW9 MIR6821-201ENST00000617625 74 ntBASIC30.84■■■□□ 2.53
NME9Q86XW9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC30.83■■■□□ 2.53
NME9Q86XW9 AC087623.3-201ENST00000607047 1098 ntBASIC30.83■■■□□ 2.53
NME9Q86XW9 pRNA.6-201ENST00000610482 90 ntBASIC30.83■■■□□ 2.53
NME9Q86XW9 pRNA.5-201ENST00000612139 90 ntBASIC30.83■■■□□ 2.53
NME9Q86XW9 pRNA.11-201ENST00000618423 90 ntBASIC30.83■■■□□ 2.53
NME9Q86XW9 pRNA.13-201ENST00000619112 90 ntBASIC30.83■■■□□ 2.53
NME9Q86XW9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
NME9Q86XW9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
NME9Q86XW9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
NME9Q86XW9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC30.82■■■□□ 2.52
NME9Q86XW9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
NME9Q86XW9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC30.82■■■□□ 2.52
NME9Q86XW9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC30.82■■■□□ 2.52
NME9Q86XW9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC30.82■■■□□ 2.52
NME9Q86XW9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC30.82■■■□□ 2.52
NME9Q86XW9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
NME9Q86XW9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
NME9Q86XW9 AC138932.3-201ENST00000567634 1902 ntBASIC30.82■■■□□ 2.52
NME9Q86XW9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC30.81■■■□□ 2.52
NME9Q86XW9 AP003733.4-201ENST00000623785 1697 ntBASIC30.81■■■□□ 2.52
NME9Q86XW9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms