Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NHLRC1Q6VVB1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.34■□□□□ 0.85
NHLRC1Q6VVB1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.34■□□□□ 0.85
NHLRC1Q6VVB1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.34■□□□□ 0.85
NHLRC1Q6VVB1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.34■□□□□ 0.85
NHLRC1Q6VVB1 AL451085.2-201ENST00000605085 799 ntBASIC20.34■□□□□ 0.85
NHLRC1Q6VVB1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
NHLRC1Q6VVB1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.34■□□□□ 0.85
NHLRC1Q6VVB1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NHLRC1Q6VVB1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.33■□□□□ 0.85
NHLRC1Q6VVB1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
NHLRC1Q6VVB1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NHLRC1Q6VVB1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
NHLRC1Q6VVB1 CLDN5-201ENST00000403084 2357 ntBASIC20.33■□□□□ 0.85
NHLRC1Q6VVB1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.33■□□□□ 0.85
NHLRC1Q6VVB1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NHLRC1Q6VVB1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
NHLRC1Q6VVB1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NHLRC1Q6VVB1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
NHLRC1Q6VVB1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NHLRC1Q6VVB1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
NHLRC1Q6VVB1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NHLRC1Q6VVB1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.32■□□□□ 0.84
NHLRC1Q6VVB1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NHLRC1Q6VVB1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NHLRC1Q6VVB1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.32■□□□□ 0.84
NHLRC1Q6VVB1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.32■□□□□ 0.84
NHLRC1Q6VVB1 Z92544.1-202ENST00000571933 1220 ntBASIC20.32■□□□□ 0.84
NHLRC1Q6VVB1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NHLRC1Q6VVB1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.32■□□□□ 0.84
NHLRC1Q6VVB1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NHLRC1Q6VVB1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NHLRC1Q6VVB1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NHLRC1Q6VVB1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NHLRC1Q6VVB1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.31■□□□□ 0.84
NHLRC1Q6VVB1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NHLRC1Q6VVB1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NHLRC1Q6VVB1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NHLRC1Q6VVB1 AC009299.2-201ENST00000482477 511 ntBASIC20.31■□□□□ 0.84
NHLRC1Q6VVB1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NHLRC1Q6VVB1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.31■□□□□ 0.84
NHLRC1Q6VVB1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.31■□□□□ 0.84
NHLRC1Q6VVB1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NHLRC1Q6VVB1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NHLRC1Q6VVB1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NHLRC1Q6VVB1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NHLRC1Q6VVB1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NHLRC1Q6VVB1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NHLRC1Q6VVB1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NHLRC1Q6VVB1 BX664725.1-201ENST00000438252 379 ntBASIC20.3■□□□□ 0.84
NHLRC1Q6VVB1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NHLRC1Q6VVB1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NHLRC1Q6VVB1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NHLRC1Q6VVB1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NHLRC1Q6VVB1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.29■□□□□ 0.84
NHLRC1Q6VVB1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.29■□□□□ 0.84
NHLRC1Q6VVB1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NHLRC1Q6VVB1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NHLRC1Q6VVB1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.29■□□□□ 0.84
NHLRC1Q6VVB1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.29■□□□□ 0.84
NHLRC1Q6VVB1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NHLRC1Q6VVB1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NHLRC1Q6VVB1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.29■□□□□ 0.84
NHLRC1Q6VVB1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NHLRC1Q6VVB1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NHLRC1Q6VVB1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NHLRC1Q6VVB1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NHLRC1Q6VVB1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.28■□□□□ 0.84
NHLRC1Q6VVB1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NHLRC1Q6VVB1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NHLRC1Q6VVB1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NHLRC1Q6VVB1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NHLRC1Q6VVB1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NHLRC1Q6VVB1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.28■□□□□ 0.84
NHLRC1Q6VVB1 AC092028.1-203ENST00000608262 953 ntBASIC20.28■□□□□ 0.84
NHLRC1Q6VVB1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
NHLRC1Q6VVB1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NHLRC1Q6VVB1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
NHLRC1Q6VVB1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.27■□□□□ 0.84
NHLRC1Q6VVB1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NHLRC1Q6VVB1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.27■□□□□ 0.84
NHLRC1Q6VVB1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NHLRC1Q6VVB1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NHLRC1Q6VVB1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NHLRC1Q6VVB1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.27■□□□□ 0.84
NHLRC1Q6VVB1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NHLRC1Q6VVB1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.27■□□□□ 0.84
NHLRC1Q6VVB1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.27■□□□□ 0.84
NHLRC1Q6VVB1 MIR6722-201ENST00000617286 78 ntBASIC20.27■□□□□ 0.84
NHLRC1Q6VVB1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NHLRC1Q6VVB1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.27■□□□□ 0.83
NHLRC1Q6VVB1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NHLRC1Q6VVB1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NHLRC1Q6VVB1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NHLRC1Q6VVB1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NHLRC1Q6VVB1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NHLRC1Q6VVB1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.26■□□□□ 0.83
NHLRC1Q6VVB1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.26■□□□□ 0.83
NHLRC1Q6VVB1 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.26■□□□□ 0.83
NHLRC1Q6VVB1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms