Protein–RNA interactions for Protein: Q504U0

C4orf46, Renal cancer differentiation gene 1 protein, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46Q504U0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
C4orf46Q504U0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C4orf46Q504U0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
C4orf46Q504U0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.19■□□□□ 0.66
C4orf46Q504U0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
C4orf46Q504U0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
C4orf46Q504U0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf46Q504U0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf46Q504U0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
C4orf46Q504U0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf46Q504U0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
C4orf46Q504U0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.18■□□□□ 0.66
C4orf46Q504U0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
C4orf46Q504U0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf46Q504U0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf46Q504U0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf46Q504U0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.18■□□□□ 0.66
C4orf46Q504U0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf46Q504U0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
C4orf46Q504U0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
C4orf46Q504U0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
C4orf46Q504U0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
C4orf46Q504U0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C4orf46Q504U0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C4orf46Q504U0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
C4orf46Q504U0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.17■□□□□ 0.66
C4orf46Q504U0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
C4orf46Q504U0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C4orf46Q504U0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C4orf46Q504U0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
C4orf46Q504U0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C4orf46Q504U0 AL137060.1-201ENST00000618151 2648 ntBASIC19.17■□□□□ 0.66
C4orf46Q504U0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
C4orf46Q504U0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.17■□□□□ 0.66
C4orf46Q504U0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf46Q504U0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf46Q504U0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf46Q504U0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.16■□□□□ 0.66
C4orf46Q504U0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
C4orf46Q504U0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
C4orf46Q504U0 AC126177.7-201ENST00000547904 679 ntBASIC19.16■□□□□ 0.66
C4orf46Q504U0 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.16■□□□□ 0.66
C4orf46Q504U0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf46Q504U0 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.16■□□□□ 0.66
C4orf46Q504U0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
C4orf46Q504U0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C4orf46Q504U0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.16■□□□□ 0.66
C4orf46Q504U0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf46Q504U0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
C4orf46Q504U0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.15■□□□□ 0.66
C4orf46Q504U0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf46Q504U0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.15■□□□□ 0.66
C4orf46Q504U0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf46Q504U0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf46Q504U0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
C4orf46Q504U0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf46Q504U0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C4orf46Q504U0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
C4orf46Q504U0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
C4orf46Q504U0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
C4orf46Q504U0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
C4orf46Q504U0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
C4orf46Q504U0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
C4orf46Q504U0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C4orf46Q504U0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
C4orf46Q504U0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.14■□□□□ 0.65
C4orf46Q504U0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
C4orf46Q504U0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
C4orf46Q504U0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.14■□□□□ 0.65
C4orf46Q504U0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.14■□□□□ 0.65
C4orf46Q504U0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
C4orf46Q504U0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C4orf46Q504U0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C4orf46Q504U0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
C4orf46Q504U0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.13■□□□□ 0.65
C4orf46Q504U0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C4orf46Q504U0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.13■□□□□ 0.65
C4orf46Q504U0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
C4orf46Q504U0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
C4orf46Q504U0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
C4orf46Q504U0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C4orf46Q504U0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C4orf46Q504U0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C4orf46Q504U0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
C4orf46Q504U0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
C4orf46Q504U0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
C4orf46Q504U0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
C4orf46Q504U0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C4orf46Q504U0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C4orf46Q504U0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.11■□□□□ 0.65
C4orf46Q504U0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C4orf46Q504U0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C4orf46Q504U0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.11■□□□□ 0.65
C4orf46Q504U0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
C4orf46Q504U0 DUX4L13-201ENST00000554103 1267 ntBASIC19.11■□□□□ 0.65
C4orf46Q504U0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.11■□□□□ 0.65
C4orf46Q504U0 DUX4L15-201ENST00000611059 1267 ntBASIC19.11■□□□□ 0.65
C4orf46Q504U0 DUX4L23-201ENST00000615195 1269 ntBASIC19.11■□□□□ 0.65
C4orf46Q504U0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
C4orf46Q504U0 DUX4L24-201ENST00000617576 1269 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms