Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBA52P62987 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.38■□□□□ 0.69
UBA52P62987 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.38■□□□□ 0.69
UBA52P62987 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.38■□□□□ 0.69
UBA52P62987 AC233723.2-201ENST00000623798 2106 ntBASIC19.38■□□□□ 0.69
UBA52P62987 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
UBA52P62987 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
UBA52P62987 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBA52P62987 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.38■□□□□ 0.69
UBA52P62987 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
UBA52P62987 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBA52P62987 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBA52P62987 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.37■□□□□ 0.69
UBA52P62987 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.37■□□□□ 0.69
UBA52P62987 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.37■□□□□ 0.69
UBA52P62987 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBA52P62987 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBA52P62987 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBA52P62987 KRT125P-201ENST00000546827 989 ntBASIC19.37■□□□□ 0.69
UBA52P62987 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.37■□□□□ 0.69
UBA52P62987 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.37■□□□□ 0.69
UBA52P62987 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBA52P62987 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
UBA52P62987 ABCB10P4-201ENST00000566803 2184 ntBASIC19.37■□□□□ 0.69
UBA52P62987 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.37■□□□□ 0.69
UBA52P62987 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
UBA52P62987 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBA52P62987 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBA52P62987 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
UBA52P62987 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBA52P62987 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBA52P62987 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBA52P62987 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBA52P62987 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
UBA52P62987 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBA52P62987 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.36■□□□□ 0.69
UBA52P62987 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.36■□□□□ 0.69
UBA52P62987 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
UBA52P62987 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBA52P62987 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBA52P62987 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBA52P62987 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBA52P62987 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBA52P62987 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
UBA52P62987 AC008406.3-201ENST00000620001 1374 ntBASIC19.35■□□□□ 0.69
UBA52P62987 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBA52P62987 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBA52P62987 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBA52P62987 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.35■□□□□ 0.69
UBA52P62987 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBA52P62987 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBA52P62987 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
UBA52P62987 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBA52P62987 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBA52P62987 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBA52P62987 KRT18P10-201ENST00000388836 1287 ntBASIC19.34■□□□□ 0.69
UBA52P62987 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBA52P62987 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
UBA52P62987 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBA52P62987 BX664725.1-201ENST00000438252 379 ntBASIC19.34■□□□□ 0.69
UBA52P62987 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
UBA52P62987 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.34■□□□□ 0.69
UBA52P62987 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.34■□□□□ 0.69
UBA52P62987 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBA52P62987 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBA52P62987 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBA52P62987 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.34■□□□□ 0.69
UBA52P62987 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBA52P62987 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBA52P62987 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBA52P62987 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.34■□□□□ 0.69
UBA52P62987 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
UBA52P62987 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBA52P62987 AC137767.1-201ENST00000602918 1920 ntBASIC19.33■□□□□ 0.69
UBA52P62987 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBA52P62987 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBA52P62987 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
UBA52P62987 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
UBA52P62987 AC022616.5-201ENST00000518796 181 ntBASIC19.33■□□□□ 0.68
UBA52P62987 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UBA52P62987 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBA52P62987 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBA52P62987 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.33■□□□□ 0.68
UBA52P62987 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBA52P62987 C1orf229-201ENST00000623686 2258 ntBASIC19.32■□□□□ 0.68
UBA52P62987 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
UBA52P62987 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
UBA52P62987 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBA52P62987 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
UBA52P62987 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.32■□□□□ 0.68
UBA52P62987 MIR4787-201ENST00000607364 84 ntBASIC19.32■□□□□ 0.68
UBA52P62987 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
UBA52P62987 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
UBA52P62987 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBA52P62987 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBA52P62987 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBA52P62987 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
UBA52P62987 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
UBA52P62987 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
UBA52P62987 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms