Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 YHL050W-AYHL050W-A 483 nt4.59□□□□□ -1.67
TDA11P38854 YHR219C-AYHR219C-A 483 nt4.59□□□□□ -1.67
TDA11P38854 YIL177W-AYIL177W-A 483 nt4.59□□□□□ -1.67
TDA11P38854 YJL225W-AYJL225W-A 483 nt4.59□□□□□ -1.67
TDA11P38854 KCH1YJR054W 1494 nt4.59□□□□□ -1.67
TDA11P38854 YLL066W-AYLL066W-A 483 nt4.59□□□□□ -1.67
TDA11P38854 YLL067W-AYLL067W-A 483 nt4.59□□□□□ -1.67
TDA11P38854 YLR346CYLR346C 306 nt4.59□□□□□ -1.67
TDA11P38854 YLR466C-AYLR466C-A 483 nt4.59□□□□□ -1.67
TDA11P38854 YLR467C-AYLR467C-A 483 nt4.59□□□□□ -1.67
TDA11P38854 YML133W-BYML133W-B 483 nt4.59□□□□□ -1.67
TDA11P38854 TOM7YNL070W 183 nt4.59□□□□□ -1.67
TDA11P38854 MET4YNL103W 2019 nt4.59□□□□□ -1.67
TDA11P38854 YNL339W-BYNL339W-B 483 nt4.59□□□□□ -1.67
TDA11P38854 BUD17YNR027W 954 nt4.59□□□□□ -1.67
TDA11P38854 YBL113W-AYBL113W-A 483 nt4.59□□□□□ -1.67
TDA11P38854 PRT1YOR361C 2292 nt4.59□□□□□ -1.67
TDA11P38854 YOR396C-AYOR396C-A 483 nt4.59□□□□□ -1.67
TDA11P38854 SMA1YPL027W 738 nt4.59□□□□□ -1.67
TDA11P38854 YPL283W-BYPL283W-B 483 nt4.59□□□□□ -1.67
TDA11P38854 YPR109WYPR109W 885 nt4.59□□□□□ -1.67
TDA11P38854 YPR204C-AYPR204C-A 483 nt4.59□□□□□ -1.67
TDA11P38854 SNF3YDL194W 2655 nt4.59□□□□□ -1.68
TDA11P38854 SEN1YLR430W 6696 nt4.58□□□□□ -1.68
TDA11P38854 SUM1YDR310C 3189 nt4.58□□□□□ -1.68
TDA11P38854 PCL8YPL219W 1479 nt4.58□□□□□ -1.68
TDA11P38854 AIR2YDL175C 1035 nt4.58□□□□□ -1.68
TDA11P38854 DAM1YGR113W 1032 nt4.58□□□□□ -1.68
TDA11P38854 CAB4YGR277C 918 nt4.58□□□□□ -1.68
TDA11P38854 ISA1YLL027W 753 nt4.58□□□□□ -1.68
TDA11P38854 TDA5YLR426W 981 nt4.58□□□□□ -1.68
TDA11P38854 PMC1YGL006W 3522 nt4.58□□□□□ -1.68
TDA11P38854 THS1YIL078W 2205 nt4.58□□□□□ -1.68
TDA11P38854 AFT1YGL071W 2073 nt4.58□□□□□ -1.68
TDA11P38854 SSB2YNL209W 1842 nt4.58□□□□□ -1.68
TDA11P38854 RTC5YOR118W 1704 nt4.58□□□□□ -1.68
TDA11P38854 SLD2YKL108W 1362 nt4.57□□□□□ -1.68
TDA11P38854 BCP1YDR361C 852 nt4.57□□□□□ -1.68
TDA11P38854 RRB1YMR131C 1536 nt4.56□□□□□ -1.68
TDA11P38854 AKL1YBR059C 3327 nt4.56□□□□□ -1.68
TDA11P38854 RCK2YLR248W 1833 nt4.56□□□□□ -1.68
TDA11P38854 HOYDL227C 1761 nt4.56□□□□□ -1.68
TDA11P38854 RRT7YLL030C 342 nt4.56□□□□□ -1.68
TDA11P38854 LAS21YJL062W 2493 nt4.56□□□□□ -1.68
TDA11P38854 ARO2YGL148W 1131 nt4.55□□□□□ -1.68
TDA11P38854 FMP48YGR052W 1110 nt4.55□□□□□ -1.68
TDA11P38854 NAT2YGR147C 867 nt4.55□□□□□ -1.68
TDA11P38854 BGL2YGR282C 942 nt4.55□□□□□ -1.68
TDA11P38854 YNL174WYNL174W 573 nt4.55□□□□□ -1.68
TDA11P38854 TRM10YOL093W 882 nt4.55□□□□□ -1.68
TDA11P38854 CKB2YOR039W 777 nt4.55□□□□□ -1.68
TDA11P38854 STE12YHR084W 2067 nt4.55□□□□□ -1.68
TDA11P38854 MRE11YMR224C 2079 nt4.55□□□□□ -1.68
TDA11P38854 FUM1YPL262W 1467 nt4.55□□□□□ -1.68
TDA11P38854 ATH1YPR026W 3636 nt4.54□□□□□ -1.68
TDA11P38854 NSG1YHR133C 876 nt4.54□□□□□ -1.68
TDA11P38854 CSM2YIL132C 642 nt4.54□□□□□ -1.68
TDA11P38854 CDC42YLR229C 576 nt4.54□□□□□ -1.68
TDA11P38854 TAF11YML015C 1041 nt4.54□□□□□ -1.68
TDA11P38854 YNL067W-AYNL067W-A 147 nt4.54□□□□□ -1.68
TDA11P38854 MRL1YPR079W 1146 nt4.54□□□□□ -1.68
TDA11P38854 NOP8YOL144W 1455 nt4.54□□□□□ -1.68
TDA11P38854 TSL1YML100W 3297 nt4.54□□□□□ -1.68
TDA11P38854 DRN1YGR093W 1524 nt4.53□□□□□ -1.68
TDA11P38854 MET3YJR010W 1536 nt4.53□□□□□ -1.68
TDA11P38854 YIL028WYIL028W 399 nt4.53□□□□□ -1.68
TDA11P38854 YKR104WYKR104W 921 nt4.53□□□□□ -1.68
TDA11P38854 PML1YLR016C 615 nt4.53□□□□□ -1.68
TDA11P38854 ATG33YLR356W 594 nt4.53□□□□□ -1.68
TDA11P38854 SPS18YNL204C 903 nt4.53□□□□□ -1.68
TDA11P38854 RFA2YNL312W 822 nt4.53□□□□□ -1.68
TDA11P38854 YOR292CYOR292C 930 nt4.53□□□□□ -1.68
TDA11P38854 YPL077CYPL077C 723 nt4.53□□□□□ -1.68
TDA11P38854 STP4YDL048C 1473 nt4.53□□□□□ -1.68
TDA11P38854 ZPR1YGR211W 1461 nt4.53□□□□□ -1.68
TDA11P38854 EGT2YNL327W 3126 nt4.53□□□□□ -1.68
TDA11P38854 SSB1YDL229W 1842 nt4.53□□□□□ -1.68
TDA11P38854 PHO84YML123C 1764 nt4.53□□□□□ -1.69
TDA11P38854 PEX30YLR324W 1572 nt4.53□□□□□ -1.69
TDA11P38854 MLF3YNL074C 1359 nt4.53□□□□□ -1.69
TDA11P38854 APL6YGR261C 2430 nt4.52□□□□□ -1.69
TDA11P38854 GAT3YLR013W 426 nt4.52□□□□□ -1.69
TDA11P38854 FBP1YLR377C 1047 nt4.52□□□□□ -1.69
TDA11P38854 CSR1YLR380W 1227 nt4.52□□□□□ -1.69
TDA11P38854 TOM40YMR203W 1164 nt4.52□□□□□ -1.69
TDA11P38854 FEX1YOR390W 1128 nt4.52□□□□□ -1.69
TDA11P38854 FEX2YPL279C 1128 nt4.52□□□□□ -1.69
TDA11P38854 ATR1YML116W 1629 nt4.52□□□□□ -1.69
TDA11P38854 TRS85YDR108W 2097 nt4.52□□□□□ -1.69
TDA11P38854 PEP5YMR231W 3090 nt4.52□□□□□ -1.69
TDA11P38854 YTA12YMR089C 2478 nt4.51□□□□□ -1.69
TDA11P38854 UBP7YIL156W 3216 nt4.51□□□□□ -1.69
TDA11P38854 DCD1YHR144C 939 nt4.51□□□□□ -1.69
TDA11P38854 FMP33YJL161W 543 nt4.51□□□□□ -1.69
TDA11P38854 PEX22YAL055W 543 nt4.51□□□□□ -1.69
TDA11P38854 PAU17YLL025W 375 nt4.51□□□□□ -1.69
TDA11P38854 GTR1YML121W 933 nt4.51□□□□□ -1.69
TDA11P38854 MDM12YOL009C 816 nt4.51□□□□□ -1.69
TDA11P38854 CLB4YLR210W 1383 nt4.51□□□□□ -1.69
TDA11P38854 YPK9YOR291W 4419 nt4.51□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms