Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNOT3O75175 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.81■■□□□ 1.08
CNOT3O75175 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.81■■□□□ 1.08
CNOT3O75175 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNOT3O75175 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.81■■□□□ 1.08
CNOT3O75175 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNOT3O75175 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNOT3O75175 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.8■■□□□ 1.08
CNOT3O75175 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNOT3O75175 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.8■■□□□ 1.08
CNOT3O75175 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.8■■□□□ 1.08
CNOT3O75175 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.8■■□□□ 1.08
CNOT3O75175 MIR4466-201ENST00000606121 54 ntBASIC21.8■■□□□ 1.08
CNOT3O75175 MIR6089-201ENST00000616698 64 ntBASIC21.8■■□□□ 1.08
CNOT3O75175 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.8■■□□□ 1.08
CNOT3O75175 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.8■■□□□ 1.08
CNOT3O75175 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CNOT3O75175 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
CNOT3O75175 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNOT3O75175 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNOT3O75175 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.79■■□□□ 1.08
CNOT3O75175 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.79■■□□□ 1.08
CNOT3O75175 AL356740.2-201ENST00000601559 647 ntBASIC21.79■■□□□ 1.08
CNOT3O75175 AL512631.2-201ENST00000604634 923 ntBASIC21.79■■□□□ 1.08
CNOT3O75175 MIR6722-201ENST00000617286 78 ntBASIC21.79■■□□□ 1.08
CNOT3O75175 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CNOT3O75175 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNOT3O75175 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNOT3O75175 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNOT3O75175 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CNOT3O75175 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.78■■□□□ 1.08
CNOT3O75175 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CNOT3O75175 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CNOT3O75175 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNOT3O75175 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNOT3O75175 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CNOT3O75175 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.78■■□□□ 1.08
CNOT3O75175 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CNOT3O75175 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CNOT3O75175 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.77■■□□□ 1.08
CNOT3O75175 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CNOT3O75175 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CNOT3O75175 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CNOT3O75175 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.77■■□□□ 1.08
CNOT3O75175 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CNOT3O75175 AL136116.3-201ENST00000402907 1138 ntBASIC21.77■■□□□ 1.08
CNOT3O75175 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.77■■□□□ 1.08
CNOT3O75175 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CNOT3O75175 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CNOT3O75175 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CNOT3O75175 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CNOT3O75175 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.77■■□□□ 1.08
CNOT3O75175 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CNOT3O75175 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CNOT3O75175 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.77■■□□□ 1.07
CNOT3O75175 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.77■■□□□ 1.07
CNOT3O75175 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CNOT3O75175 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CNOT3O75175 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNOT3O75175 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CNOT3O75175 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
CNOT3O75175 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNOT3O75175 AC004448.1-201ENST00000458332 883 ntBASIC21.76■■□□□ 1.07
CNOT3O75175 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.76■■□□□ 1.07
CNOT3O75175 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CNOT3O75175 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.76■■□□□ 1.07
CNOT3O75175 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNOT3O75175 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNOT3O75175 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNOT3O75175 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNOT3O75175 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.75■■□□□ 1.07
CNOT3O75175 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.75■■□□□ 1.07
CNOT3O75175 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.75■■□□□ 1.07
CNOT3O75175 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.75■■□□□ 1.07
CNOT3O75175 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNOT3O75175 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNOT3O75175 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNOT3O75175 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CNOT3O75175 AC019069.1-201ENST00000610008 1333 ntBASIC21.75■■□□□ 1.07
CNOT3O75175 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.75■■□□□ 1.07
CNOT3O75175 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNOT3O75175 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.74■■□□□ 1.07
CNOT3O75175 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CNOT3O75175 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNOT3O75175 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNOT3O75175 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNOT3O75175 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.74■■□□□ 1.07
CNOT3O75175 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNOT3O75175 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.74■■□□□ 1.07
CNOT3O75175 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.74■■□□□ 1.07
CNOT3O75175 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CNOT3O75175 AC131274.2-201ENST00000580697 1507 ntBASIC21.74■■□□□ 1.07
CNOT3O75175 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNOT3O75175 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
CNOT3O75175 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNOT3O75175 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.73■■□□□ 1.07
CNOT3O75175 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CNOT3O75175 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CNOT3O75175 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNOT3O75175 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms