Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH7O60245 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH7O60245 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH7O60245 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDH7O60245 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH7O60245 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH7O60245 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH7O60245 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH7O60245 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH7O60245 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.65■■□□□ 1.06
PCDH7O60245 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDH7O60245 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDH7O60245 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PCDH7O60245 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDH7O60245 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDH7O60245 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.64■■□□□ 1.06
PCDH7O60245 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDH7O60245 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDH7O60245 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.64■■□□□ 1.06
PCDH7O60245 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.64■■□□□ 1.05
PCDH7O60245 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDH7O60245 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH7O60245 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDH7O60245 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH7O60245 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH7O60245 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH7O60245 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH7O60245 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH7O60245 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH7O60245 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
PCDH7O60245 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH7O60245 AC092068.2-201ENST00000590491 1708 ntBASIC21.63■■□□□ 1.05
PCDH7O60245 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH7O60245 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH7O60245 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH7O60245 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDH7O60245 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDH7O60245 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH7O60245 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.62■■□□□ 1.05
PCDH7O60245 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH7O60245 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH7O60245 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDH7O60245 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PCDH7O60245 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH7O60245 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH7O60245 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH7O60245 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.61■■□□□ 1.05
PCDH7O60245 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH7O60245 AC137630.3-201ENST00000607245 391 ntBASIC21.61■■□□□ 1.05
PCDH7O60245 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDH7O60245 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH7O60245 AC012676.1-201ENST00000574705 1949 ntBASIC21.61■■□□□ 1.05
PCDH7O60245 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH7O60245 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH7O60245 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PCDH7O60245 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH7O60245 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH7O60245 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.6■■□□□ 1.05
PCDH7O60245 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDH7O60245 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH7O60245 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.6■■□□□ 1.05
PCDH7O60245 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH7O60245 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH7O60245 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PCDH7O60245 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDH7O60245 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH7O60245 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH7O60245 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDH7O60245 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH7O60245 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDH7O60245 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
PCDH7O60245 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDH7O60245 SNX5-217ENST00000606557 1087 ntBASIC21.59■■□□□ 1.05
PCDH7O60245 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDH7O60245 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDH7O60245 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PCDH7O60245 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH7O60245 C9orf163-202ENST00000624034 2573 ntBASIC21.58■■□□□ 1.05
PCDH7O60245 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDH7O60245 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDH7O60245 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDH7O60245 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH7O60245 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH7O60245 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDH7O60245 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDH7O60245 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH7O60245 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH7O60245 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDH7O60245 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDH7O60245 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH7O60245 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH7O60245 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH7O60245 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
PCDH7O60245 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDH7O60245 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH7O60245 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.56■■□□□ 1.04
PCDH7O60245 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.56■■□□□ 1.04
PCDH7O60245 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.56■■□□□ 1.04
PCDH7O60245 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.56■■□□□ 1.04
PCDH7O60245 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms