Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHKB-CPT1BH3BT56 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHKB-CPT1BH3BT56 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHKB-CPT1BH3BT56 OR6D1P-202ENST00000641007 5290 ntBASIC12.76□□□□□ -0.37
CHKB-CPT1BH3BT56 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHKB-CPT1BH3BT56 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
CHKB-CPT1BH3BT56 AL139125.2-201ENST00000623134 1869 ntBASIC12.76□□□□□ -0.37
CHKB-CPT1BH3BT56 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHKB-CPT1BH3BT56 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CHKB-CPT1BH3BT56 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CHKB-CPT1BH3BT56 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC12.76□□□□□ -0.37
CHKB-CPT1BH3BT56 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CHKB-CPT1BH3BT56 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CHKB-CPT1BH3BT56 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHKB-CPT1BH3BT56 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CHKB-CPT1BH3BT56 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CHKB-CPT1BH3BT56 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHKB-CPT1BH3BT56 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CHKB-CPT1BH3BT56 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC12.74□□□□□ -0.37
CHKB-CPT1BH3BT56 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHKB-CPT1BH3BT56 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHKB-CPT1BH3BT56 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHKB-CPT1BH3BT56 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHKB-CPT1BH3BT56 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHKB-CPT1BH3BT56 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CHKB-CPT1BH3BT56 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CHKB-CPT1BH3BT56 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CHKB-CPT1BH3BT56 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CHKB-CPT1BH3BT56 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CHKB-CPT1BH3BT56 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC12.74□□□□□ -0.37
CHKB-CPT1BH3BT56 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHKB-CPT1BH3BT56 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHKB-CPT1BH3BT56 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CHKB-CPT1BH3BT56 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 INO80B-203ENST00000409917 796 ntTSL 2 BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 DUSP8P5-201ENST00000422884 1815 ntBASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CHKB-CPT1BH3BT56 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CHKB-CPT1BH3BT56 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CHKB-CPT1BH3BT56 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC12.72□□□□□ -0.37
CHKB-CPT1BH3BT56 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC12.72□□□□□ -0.37
CHKB-CPT1BH3BT56 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC12.72□□□□□ -0.37
CHKB-CPT1BH3BT56 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHKB-CPT1BH3BT56 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHKB-CPT1BH3BT56 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC12.72□□□□□ -0.37
CHKB-CPT1BH3BT56 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CHKB-CPT1BH3BT56 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHKB-CPT1BH3BT56 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHKB-CPT1BH3BT56 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHKB-CPT1BH3BT56 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CHKB-CPT1BH3BT56 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
CHKB-CPT1BH3BT56 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHKB-CPT1BH3BT56 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CHKB-CPT1BH3BT56 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CHKB-CPT1BH3BT56 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CHKB-CPT1BH3BT56 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms